You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001732_00518
You are here: Home > Sequence: MGYG000001732_00518
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | HGM11530 sp900751685 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; HGM11530; HGM11530 sp900751685 | |||||||||||
| CAZyme ID | MGYG000001732_00518 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1297; End: 7317 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 133 | 830 | 8.7e-60 | 0.6928191489361702 |
| CBM6 | 1067 | 1207 | 1.1e-20 | 0.9420289855072463 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 4.37e-18 | 123 | 566 | 3 | 428 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| cd04084 | CBM6_xylanase-like | 2.74e-17 | 1096 | 1205 | 15 | 123 | Carbohydrate Binding Module 6 (CBM6); many are appended to glycoside hydrolase (GH) family 11 and GH43 xylanase domains. This family includes carbohydrate binding module 6 (CBM6) domains that are appended mainly to glycoside hydrolase (GH) family domains, including GH3, GH11, and GH43 domains. These CBM6s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. Examples of proteins having CMB6s belonging to this family are Microbispora bispora GghA, a 1,4-beta-D-glucan glucohydrolase (GH3); Clostridium thermocellum xylanase U (GH11), and Penicillium purpurogenum ABF3, a bifunctional alpha-L-arabinofuranosidase/xylobiohydrolase (GH43). GH3 comprises enzymes with activities including beta-glucosidase (hydrolyzes beta-galactosidase) and beta-xylosidase (hydrolyzes 1,4-beta-D-xylosidase). GH11 family comprises enzymes with xylanase (endo-1,4-beta-xylanase) activity which catalyze the hydrolysis of beta-1,4 bonds of xylan, the major component of hemicelluloses, to generate xylooligosaccharides and xylose. GH43 includes beta-xylosidases and beta-xylanases, using aryl-glycosides as substrates. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold. |
| pfam03422 | CBM_6 | 6.96e-13 | 1078 | 1207 | 2 | 125 | Carbohydrate binding module (family 6). |
| smart00606 | CBD_IV | 1.11e-12 | 1072 | 1205 | 4 | 129 | Cellulose Binding Domain Type IV. |
| PRK10340 | ebgA | 1.50e-11 | 191 | 566 | 110 | 471 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGY48213.1 | 6.03e-188 | 137 | 1063 | 30 | 946 |
| ANX00219.1 | 7.64e-185 | 136 | 1048 | 4 | 899 |
| AGI38265.1 | 7.64e-185 | 136 | 1048 | 4 | 899 |
| ANW97658.1 | 7.64e-185 | 136 | 1048 | 4 | 899 |
| AGC67186.1 | 7.64e-185 | 136 | 1048 | 4 | 899 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6ZJV_A | 1.05e-06 | 223 | 539 | 158 | 441 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A [Arthrobacter sp. 32cB],6ZJW_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with galactose [Arthrobacter sp. 32cB],6ZJX_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant D207A in complex with saccharose [Arthrobacter sp. 32cB] |
| 6ETZ_A | 1.37e-06 | 223 | 539 | 137 | 420 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB [Arthrobacter sp. 32cB],6H1P_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB - data collected at room temperature [Arthrobacter sp. 32cB] |
| 6SEB_A | 1.38e-06 | 223 | 539 | 158 | 441 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB in complex with IPTG [Arthrobacter sp. 32cB],6SEC_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cBon complex with ONPG [Arthrobacter sp. 32cB],6SED_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose [Arthrobacter sp. 32cB] |
| 6ZJP_A | 1.38e-06 | 223 | 539 | 158 | 441 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q [Arthrobacter sp. 32cB] |
| 6ZJQ_A | 1.38e-06 | 223 | 539 | 160 | 443 | Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q in complex with galactose [Arthrobacter sp. 32cB],6ZJR_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q in complex with lactulose [Arthrobacter sp. 32cB] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000286 | 0.998913 | 0.000322 | 0.000166 | 0.000157 | 0.000145 |
