CAZyme Information: MGYG000001735_02092

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides
• CAZyme ID: MGYG000001735_02092
• CAZy Family: GH110
• CAZyme Description: Alpha-1,3-galactosidase B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
608	MGYG000001735_21|CGC4	68302.17	5.3841

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001735	5309957	MAG	Sweden	Europe

• Gene Location: Start: 72795; End: 74621 Strand: +

Full Sequence      

MKNSIAVFSTLLCFVLLCSCAQTKNPYDLSNFGLVPDTKENASPLMAKALEQIAVSHTSD
DTIRIVLPKGRYDFYPEGAAQKEYFISNHDQDNPKLVGLPFENMKNIVFDGQGSELIFHG
RMLPVSLVNSENCTLKNFSIDFENPHISQLKVLENDTVAGAITYEVAPWVQYEIRDSAFV
AKGEGWEHSPRWGIAFEGDTKRLVYTTSDISVGALGVTELSPRVIKSTKWKNKKLIPGTV
VAMRGYGRPTPGIFVSYDTNTTLDNIQVHYAEGMGLLAQMSENITLNKFSVCLRGDSDPR
YFTTQADATHFSGCKGKIISVGGLYEGMMDDAINVHGTYLKIQKRVDDKTLVGEYMHSQS
YGFEWGFPGDAVQFIDSKTMEIIGNQNKVASIKAIDKPSAHGAKQFEIVFEESIDPAISE
AGTFGIENLEWTPEVYFADNVIRNNRARGSLFSTPKKTVVENNVFDHTSGTAILLCGDCN
GWFETGACHDVLIRNNKFINSLTNMFQFTNAVISIYPEIPDLKDQKKYFHSDIVIENNEF
ETFDAPILYAKSVDGLIFRNNTIKQNNQYPAFHWNKHRFFFQRVINSEIKDNQFDGGFDE
KRDVLIEN

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH110	27	592	8.7e-234	0.9963503649635036

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	0.003	434	575	10	146	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50242.1	0.0	10	607	8	601
EDN88509.1	0.0	10	607	8	601
QIX64824.1	0.0	9	608	8	607
BBK92832.1	0.0	9	608	8	607
QCY57951.1	0.0	9	608	8	607

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7JW4_A	4.69e-89	21	606	22	609	Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A	2.53e-88	21	606	22	609	Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A6LFT2	0.0	9	608	8	607	Alpha-1,3-galactosidase B OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=glaB PE=3 SV=1
A6KWM0	2.48e-295	12	591	9	592	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB1 PE=3 SV=1
Q5LGZ8	7.08e-291	20	591	21	595	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaB PE=1 SV=1
Q64XV2	4.08e-290	20	591	21	595	Alpha-1,3-galactosidase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaB PE=3 SV=1
A6L2M8	6.48e-275	13	597	9	598	Alpha-1,3-galactosidase B OS=Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154) OX=435590 GN=glaB2 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000085	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001735_02092.