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CAZyme Information: MGYG000001735_03509

You are here: Home > Sequence: MGYG000001735_03509

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides;
CAZyme ID MGYG000001735_03509
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1063 MGYG000001735_64|CGC1 121460.63 5.9902
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001735 5309957 MAG Sweden Europe
Gene Location Start: 13718;  End: 16909  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001735_03509.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 29 678 3.3e-69 0.6316489361702128

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 3.78e-29 31 535 9 499
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 1.63e-22 31 475 9 443
beta-D-glucuronidase; Provisional
PRK10340 ebgA 2.61e-18 37 476 44 471
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02837 Glyco_hydro_2_N 3.81e-13 34 189 1 157
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam00703 Glyco_hydro_2 1.75e-08 227 310 28 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQD16168.1 0.0 32 1063 22 1075
QQT56131.1 0.0 28 1063 18 1074
QTE22603.1 0.0 32 1063 21 1066
QOD61956.1 0.0 1 1063 1 1066
AOM80476.1 0.0 31 1062 19 1049

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SD0_A 1.49e-21 30 484 35 472
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
6S6Z_A 1.49e-21 30 484 34 471
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6JZ1_A 9.71e-19 18 452 4 418
Apostructure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ1_B Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ5_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ5_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ6_A b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ6_B b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_A b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_B b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ8_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus],6JZ8_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus]
5Z18_A 1.04e-18 18 452 28 442
Thecrystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_B The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_C The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_D The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_E The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_F The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z19_A The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_B The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_C The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_D The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_E The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_F The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],6JZ2_A b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ2_B b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ3_A b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ3_B b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ4_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus],6JZ4_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus]
6ECA_A 1.26e-17 35 496 41 495
Lactobacillusrhamnosus Beta-glucuronidase [Lacticaseibacillus rhamnosus],6ECA_B Lactobacillus rhamnosus Beta-glucuronidase [Lacticaseibacillus rhamnosus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 8.14e-21 30 484 35 472
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
A8AKB8 3.27e-16 33 466 51 477
Beta-galactosidase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=lacZ PE=3 SV=1
P05804 1.81e-15 31 452 9 413
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
Q3Z583 1.48e-14 31 466 49 477
Beta-galactosidase OS=Shigella sonnei (strain Ss046) OX=300269 GN=lacZ PE=3 SV=1
Q0TKT1 1.48e-14 31 466 49 477
Beta-galactosidase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000441 0.996696 0.002232 0.000205 0.000196 0.000186

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001735_03509.