dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001738_02189

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Species

Duncaniella sp001701225

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella sp001701225

CAZyme ID

MGYG000001738_02189

CAZy Family

PL1

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
599		64703.08	4.8118

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001738	3129928	MAG	Sweden	Europe

Gene Location

Start: 26732; End: 28531 Strand: -

No EC number prediction in MGYG000001738_02189.

Family	Start	End	Evalue	family coverage
PL1	224	390	4.2e-41	0.806930693069307

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3866	PelB	1.74e-54	225	504	102	340	Pectate lyase [Carbohydrate transport and metabolism].
smart00656	Amb_all	1.43e-31	225	392	17	190	Amb_all domain.
pfam00544	Pec_lyase_C	3.98e-16	189	388	8	211	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AXP82033.1	7.97e-159	4	537	2	550
AGF55382.1	3.03e-154	36	546	95	596
AQR94278.1	9.68e-153	36	546	95	596
AQS15728.1	3.05e-149	36	546	71	572
AGX44552.1	3.05e-149	36	546	71	572

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3VMV_A	4.41e-26	188	410	47	259	Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1AIR_A	1.50e-15	231	416	94	280	ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
2EWE_A	3.59e-15	231	416	94	280	ChainA, Pectate lyase C [Dickeya chrysanthemi]
1VBL_A	1.36e-14	225	388	133	330	Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3ZSC_A	5.91e-14	223	365	67	213	Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q65DC2	1.06e-24	165	396	60	280	Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
Q8GCB2	1.06e-24	165	396	60	280	Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
B1B6T1	1.06e-24	165	396	60	280	Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q5AVN4	1.81e-16	225	401	99	277	Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
P0C1C2	7.19e-16	231	415	115	300	Pectate lyase 3 OS=Pectobacterium carotovorum OX=554 GN=pel3 PE=1 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000432	0.998728	0.000307	0.000208	0.000162	0.000144

There is no transmembrane helices in MGYG000001738_02189.