CAZyme Information: MGYG000001738_02231

Basic Information

• Species: Duncaniella sp001701225
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Duncaniella; Duncaniella sp001701225
• CAZyme ID: MGYG000001738_02231
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
900	MGYG000001738_32|CGC1	97405.92	5.0035

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001738	3129928	MAG	Sweden	Europe

• Gene Location: Start: 145; End: 2847 Strand: -

Full Sequence      

MKKILTLLVLAASVPAAWGAIAGSLDPESVVEQWSNSSTSPKIIDINFSDATWPATWQGK
YGLDCPSFSDGGYVNAILSVPALGGDAGVTYPVMFHNCTFATKQSYNGLAGATAAFCRQY
YDNQKATGNSAATMNNWTVAGHTHYLEDNIERNERNVPTYGEAGFVQMCRDAASTDASGA
KVSMHGWMEIDHIPYVERIQWSWSSTSWGRGIKCDIKIGSEDWKPLVWMGSERQKQGWTV
FSDQGYFMENVINASDVSLRWRVWDGEIQGAPVQSDVFNQYADPMAQRQAPRVHKLQIFG
TPVTAAQADYARNNPVSDPGELSDLSQYGGGGGEQPGKAEPADTGLTAFPTAEGFGRYAT
GGRGGKVVKVTSLADDGSEGTLRWAFNQHKGEPITILFAVSGEIALKSQLRVSRKDWTLA
GQSAPGEGIVITRNKVNLGGSENFIVRNMRFRVGQKDMDGNILAENALGAENCANFIFDH
CSFGWSVEENMNTADSHFLTVQHSIIHEGLYDAGHSKGSRGYGCQWGGSPATYHHNLLAH
NNSRSARINGARGEDYVVFMEYANNVNYNYSKEGACYGGENTAAINEYNGLNSAHECNFM
GNYYKPGPASSRSSVVFVNASYARDGATSWAPAKWFVDGNKAEGFAAATADNWKAMKAET
YTLDQIKAPARITPANAYWKYGRGGNEGDYTPSKYMLENIEKADDAFAYVTAHAGTVNRD
KVERRVAEDAVNGRATYAGKALGNGIIDTEKDAEGFFAYSTDYTVPTDTDGDGIPDEWER
SAKGLDPAVADQNKTNPEGRTALEVYLNSLMGEQGVMEFGDSGLEGITVATDACWDSVTR
TLTVVPEAIGSTLEAYTPDGRLVSSTRIASTSVSMADAPATVLLLRITAPGTTPRVLKVK

Enzyme Prediction     

No EC number prediction in MGYG000001738_02231.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	401	604	6.1e-59	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00544	Pec_lyase_C	7.13e-04	440	589	58	209	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ANU63102.1	0.0	16	899	20	1292
ASB38821.1	0.0	16	899	20	1292
QQR09559.1	0.0	16	899	20	1292
QCD41735.1	0.0	1	900	1	1292
QCP72287.1	0.0	20	900	32	1316

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6FI2_A	9.68e-07	353	449	46	137	VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B8NQQ7	5.23e-38	346	811	20	414	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83	2.64e-36	346	811	20	414	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297	6.76e-36	344	813	18	413	Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B0XMA2	1.64e-35	342	811	17	415	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88	1.64e-35	342	811	17	415	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000253	0.999130	0.000153	0.000168	0.000149	0.000135

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001738_02231.