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CAZyme Information: MGYG000001743_01130
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; RF39; UBA660; CAG-884; | |||||||||||
| CAZyme ID | MGYG000001743_01130 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 341; End: 871 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM50 | 33 | 75 | 1.6e-17 | 0.975 |
| CBM50 | 133 | 175 | 7.6e-17 | 0.975 |
| CBM50 | 83 | 125 | 8.1e-17 | 0.975 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 1.66e-24 | 4 | 174 | 355 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 6.33e-22 | 26 | 172 | 326 | 521 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK10783 | mltD | 1.12e-17 | 52 | 169 | 315 | 441 | membrane-bound lytic murein transglycosylase D; Provisional |
| PRK10783 | mltD | 3.45e-17 | 15 | 131 | 328 | 453 | membrane-bound lytic murein transglycosylase D; Provisional |
| pfam01476 | LysM | 2.66e-15 | 33 | 75 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ABB15789.1 | 1.26e-13 | 1 | 77 | 47 | 132 |
| ACL69398.1 | 3.18e-13 | 7 | 75 | 121 | 189 |
| UAC47898.1 | 4.30e-13 | 1 | 75 | 269 | 348 |
| AGK52565.1 | 9.35e-13 | 4 | 75 | 130 | 207 |
| QRG70709.1 | 1.02e-12 | 4 | 80 | 48 | 125 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4UZ2_A | 2.95e-08 | 32 | 75 | 4 | 47 | Crystalstructure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_D Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ3_A Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8] |
| 4XCM_A | 2.00e-07 | 32 | 75 | 4 | 47 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 2MKX_A | 1.66e-06 | 33 | 74 | 7 | 48 | Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583] |
| 4S3J_A | 6.03e-06 | 34 | 83 | 7 | 56 | Crystalstructure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_B Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_C Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O07532 | 7.11e-11 | 3 | 77 | 50 | 138 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| O31852 | 2.64e-09 | 1 | 82 | 48 | 139 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| P54421 | 5.03e-08 | 32 | 72 | 87 | 127 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| P21171 | 4.91e-07 | 16 | 77 | 186 | 247 | Probable endopeptidase p60 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=iap PE=1 SV=2 |
| Q9CIT4 | 8.76e-07 | 32 | 74 | 242 | 284 | Probable N-acetylmuramidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=acmA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000068 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |