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CAZyme Information: MGYG000001748_00825

You are here: Home > Sequence: MGYG000001748_00825

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-56 sp900762665
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-56; CAG-56 sp900762665
CAZyme ID MGYG000001748_00825
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1844 MGYG000001748_7|CGC2 204564.89 4.7684
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001748 4218051 MAG Sweden Europe
Gene Location Start: 44516;  End: 50050  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001748_00825.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 348 869 1.3e-172 0.9960238568588469
CBM22 1256 1394 1.7e-26 0.9770992366412213

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 4.81e-128 348 869 2 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 5.48e-90 345 895 9 527
Uncharacterized conserved protein, DUF1680 family [Function unknown].
PTZ00121 PTZ00121 1.21e-22 1425 1768 1221 1569
MAEBL; Provisional
PTZ00121 PTZ00121 4.21e-19 1412 1814 1167 1534
MAEBL; Provisional
pfam02018 CBM_4_9 6.58e-18 1255 1396 2 132
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADL33431.1 4.63e-201 340 1150 2 776
ANY68649.1 3.67e-197 268 1245 282 1209
CBL17203.1 3.80e-196 333 1150 32 814
AIQ16786.1 1.25e-185 340 1246 16 859
QSF44176.1 2.84e-183 340 1247 16 860

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 2.56e-98 326 1109 11 772
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 7.54e-94 326 1109 11 772
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
3WRE_A 1.21e-07 408 827 81 520
Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A 1.22e-07 408 827 81 520
Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]
7EXU_A 2.76e-07 408 827 81 520
ChainA, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P36917 2.45e-08 1256 1415 197 340
Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1
E8MGH8 6.62e-07 408 827 81 520
Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000296 0.999001 0.000165 0.000199 0.000159 0.000142

TMHMM  Annotations      download full data without filtering help

start end
12 31