CAZyme Information: MGYG000001748_01736

Basic Information

• Species: CAG-56 sp900762665
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-56; CAG-56 sp900762665
• CAZyme ID: MGYG000001748_01736
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2150	MGYG000001748_17|CGC1	237897.79	4.8462

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001748	4218051	MAG	Sweden	Europe

• Gene Location: Start: 83156; End: 89608 Strand: -

Full Sequence      

MRVRNKILACVLSASMLFASVIPMNASAAEISVGSLDFARNGLEVNYLREPIGVDDQQPT
FSWMLTSDGYDKQQSAYRIVVSSAREKAERHQGDVWDSGKVEGEDNYDVVYEGTELKSRT
KYYWSVQVWDEDGRETGWSEVSFFETGIMSQEEWKGEWIGINDTDMDFSGANWIWRRDGA
DFAGTPEGTQYFRKGFRTNSDKDITSVYVGLTADDEYEFYVNGQLVGNNSGVDSWKNGKL
FDVTQLVSTDKENIVAVSAYNSSRGYAGLLAKIEVTYSDGSKDTVVSDASWKLSKTEEAG
WYAVDYNDSGWTIPDQMEKYGNSPWGSGVSPNAENAFAATVVRKEFEAKKEIAGAHAYVS
GLGFFEMKINGRLPDDTLMNVANTQYTQTASYRAFDVTDLVKQGKNAIGVELGNNFYNET
CSVWNWQDAAWRDAPKLRMELKLDYTDGTSESITTDGTWKATKEGPITTNSIYYGETYDA
RKELVDEQNVPYAEAQYDETGWGTAEIMEAPAGKLKAQIMEPMRRTEEKKPESIQKLDNG
SYVITAPHMMSGWIKLVIRGADAGDKVTITYGEKRGSDGQVQKLGGKDGVNAGWWPKAYN
QQDNYICKGQAVETFEPKFSYKGYHYVQIDNYPGELTMDDVTCYRISNDMETTGEFDSSS
ELVNDLHFMMVNTMNNNMQGKPTDTPVWEKNGWLGDANVGLETMTYNYGFANMLTHFTEI
MEDCQKDFNNVPNMVPTQGWGNDNTVTWNAIFVFGVDQMWDTYGNESYIAEQYDAMRKLA
LKDIEESKKYGWTWSDGQLADWVSPMGYGEAQQNLPYDEGTSEGSGIVGTGMTYRLLETM
AGLADKLGKTEDAAEYRAAMEKIYTAFNEKFYNREKQIYETTTWDGGDKKQYRTKYRQTS
QLIPLAFDMVPEEYKQAVLINLVKDIKDKGYHLDTGCVGTKFILPVLADNGYEDVAYRIL
LQESYPSWGFMLKNEQVSSGASLWEMWETTSRSLGHYFLGTYDEWLYKGIAGIRDMKDGY
KTVTIEPTLSTRMASADSNEAFAAGSVKTVRGDVTSRWSLDISTNRAVFDINVPVGTTAK
ILIPGGNAADITAGGNRISTEMQGIHKIYGEDGKIAIEAGSGTYKFETTVVPDELEKVEL
QKEILQAEGLNELDYLKPAWEAYQTKVSSAKAALTNPETSQENIDKAVVSLQDAKRVLDE
NINVSRQALKDVIAKQEKINYVEYAYENVAAYERAYQDAVELAEDRDAKNDALDKAAEDL
QKAESILEEGSRFTNLAKGKAVSASSTHEDAYWGWGKDFVADGDRKNQKDKDSEYAGYSS
NLGNKETDHEEWVSIDLRKRQEVNAVTFYGATQSPDRPGTCYGFPKSFDIQVSRDGKTWT
TVHSEDNYPIPSYGPVTFAFDKVEARYVRLFARHLNQKATDNNFYYLQLSEFEIYHSLNT
TANVTVEEITGPASKTAYGSFDLTPGTIRVEGQRVAGIWTLEDQNGNEMEFNKAPAGSYT
AKLTFTAPTIFTFDKILQRDNVTVEDNGRDLVYRFPVEIVKADQADVSYEDTFVFDVGGQ
GQIDLGKVLKKYGPLDGLLLGQPADKDHVLTGEVKLEDGILTFQVNAVNSKDLTATIPVT
VKAQNFKDFTLEVKVVLTDKIAVEIACEALDALYTGREYRGLGTPSAVVKESQEAYSGGF
DIVYNTENGRAPVDAGEYTVTITPSDSNYAGSLTKTFKISHKVIVFDQLFAQAGNSDLKW
DEKTEIIDVSATDRDGETVNMDRVVLTYTTDNAKVAVVDTKGVVTALNAGKANIIVRATA
DGSRIDCKVPVTVSELQPESPAIAGKSTTMVVLNRVNGYEYAVEGEDGSLKFSDRVLFEN
LKPGKTYKFYQRFKATATHDAGTTSEALIIKTDQRVSVESVQLDKTVLVLEKGQTETLAA
KILPANATDPSYTFESSDPKVASVNRDGVVKANGSGSAVITVKAADGKTAVCTVTVKAGE
TPGKPAQIQPKSVGLNVSKQTMGIRETAVLKAQVQPSNASDKKVIYKSSNSKVVSVSTSG
KLTAKKKGTASITVTTANGKKATCKVTVKAAPKSLKLNAKSKTLKIKKTYKLKAKLSKGS
AGKVTYRSSNSRVAKVDSRGKITALRKGKTTITAKTYNGKKAAVRITVRK

Enzyme Prediction     

No EC number prediction in MGYG000001748_01736.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	534	1081	1e-127	0.9940476190476191
CBM67	171	325	2.3e-34	0.9943181818181818
CBM67	337	511	1e-26	0.8920454545454546
CBM32	1283	1432	2.2e-18	0.9516129032258065

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	4.39e-84	651	1010	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	4.05e-53	350	527	1	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
COG5492	YjdB	2.44e-18	1896	2064	179	329	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam05592	Bac_rhamnosid	4.19e-17	535	647	1	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam00754	F5_F8_type_C	5.24e-14	1281	1410	1	110	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCI59736.1	0.0	25	1493	33	1455
QYJ14959.1	1.33e-232	42	1126	41	1079
AQS56111.1	9.86e-223	94	1126	14	1014
SDU74751.1	8.67e-202	45	1101	53	1071
QUC55736.1	1.12e-194	34	1101	50	1071

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	3.22e-135	45	1126	11	1028	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	8.71e-116	21	1126	14	939	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	8.63e-71	343	1094	135	859	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6T0Q_A	2.06e-19	166	333	193	353	PleurotusOstreatus Lectin (POL), apo form [Pleurotus ostreatus]
6T1D_A	2.15e-19	166	333	196	356	PleurotusOstreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_B Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_C Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_D Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_E Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_F Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	1.30e-134	45	1126	11	1028	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KPL4	5.70e-97	35	1125	29	946	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
T2KNB2	7.50e-78	342	1127	177	921	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	4.78e-64	51	1084	43	879	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KM26	1.32e-10	43	147	472	577	Bifunctional sulfatase/alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22250 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000321	0.998754	0.000218	0.000254	0.000204	0.000187

TMHMM  Annotations     

start	end
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