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CAZyme Information: MGYG000001749_01892
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Hydrogeniiclostridium sp900752115 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Hydrogeniiclostridium; Hydrogeniiclostridium sp900752115 | |||||||||||
| CAZyme ID | MGYG000001749_01892 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 4606; End: 10959 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 3.63e-59 | 819 | 1361 | 2 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| pfam18824 | LPD11 | 1.15e-28 | 2 | 64 | 5 | 69 | Large polyvalent protein-associated domain 11. This is an alpha-helical domain with conserved hydrophobic residues. It is found in polyvalent proteins of conjugative elements. |
| cd18011 | DEXDc_RapA | 1.92e-12 | 1307 | 1565 | 1 | 183 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| smart00487 | DEXDc | 6.26e-10 | 1305 | 1408 | 7 | 110 | DEAD-like helicases superfamily. |
| cd17919 | DEXHc_Snf | 6.62e-10 | 1307 | 1562 | 1 | 175 | DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIW86704.1 | 0.0 | 523 | 2048 | 1616 | 3210 |
| QIW86628.1 | 0.0 | 523 | 2048 | 1616 | 3210 |
| ASV45029.1 | 0.0 | 523 | 2048 | 1548 | 3142 |
| AEY69616.1 | 3.89e-299 | 523 | 2109 | 1689 | 3346 |
| AXF51455.1 | 7.68e-297 | 509 | 2094 | 1760 | 3424 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 3.54e-32 | 542 | 1675 | 51 | 1243 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| P52284 | 4.32e-06 | 593 | 706 | 5 | 115 | Type II methyltransferase M.CvrRI OS=Paramecium bursaria Chlorella virus XZ-6E OX=36360 GN=CVIRIM PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000066 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |