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CAZyme Information: MGYG000001750_00003

You are here: Home > Sequence: MGYG000001750_00003

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola ilei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola ilei
CAZyme ID MGYG000001750_00003
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
866 MGYG000001750_1|CGC1 96195.59 5.8384
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001750 2839699 MAG Sweden Europe
Gene Location Start: 4858;  End: 7458  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 60 305 1.2e-72 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 1.18e-121 26 830 23 734
beta-glucosidase BglX.
PLN03080 PLN03080 7.95e-117 24 822 39 743
Probable beta-xylosidase; Provisional
COG1472 BglX 3.77e-80 29 401 14 366
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 5.61e-49 63 336 63 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 7.10e-46 374 745 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37431.1 0.0 1 864 1 864
QUT88743.1 0.0 1 863 1 862
ALJ60264.1 0.0 1 863 1 862
EDV05842.1 0.0 1 863 17 878
QDO68481.1 0.0 1 863 1 862

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 1.34e-93 29 845 17 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 1.34e-93 29 845 17 715
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5Z87_A 5.52e-83 54 851 111 774
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
6Q7I_A 2.79e-82 26 845 41 737
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
6R5I_A 4.61e-79 83 848 83 719
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 1.34e-314 13 863 10 861
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q94KD8 6.26e-98 36 853 53 755
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
B0Y0I4 3.55e-96 37 789 52 680
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=bxlB PE=3 SV=1
Q4WFI6 3.55e-96 37 789 52 680
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=bxlB PE=3 SV=1
A1DJS5 4.95e-96 11 789 19 680
Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000375 0.998903 0.000226 0.000170 0.000165 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001750_00003.