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CAZyme Information: MGYG000001750_00452

You are here: Home > Sequence: MGYG000001750_00452

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola ilei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola ilei
CAZyme ID MGYG000001750_00452
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
466 51745.9 7.2704
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001750 2839699 MAG Sweden Europe
Gene Location Start: 42652;  End: 44052  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001750_00452.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 80 438 2.3e-74 0.9323076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.50e-67 21 363 47 398
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 4.90e-18 51 430 24 363
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 6.15e-15 85 428 9 309
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 1.36e-14 33 424 47 408
polygalacturonase ADPG
PLN03010 PLN03010 1.18e-11 52 440 48 390
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY35504.1 7.73e-276 26 465 23 462
AII62903.1 1.30e-270 1 465 1 465
QUT83816.1 1.30e-270 1 465 1 465
QJR67967.1 1.30e-270 1 465 1 465
QJR55696.1 1.30e-270 1 465 1 465

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 4.27e-82 35 433 12 421
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 7.46e-77 47 460 41 452
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 1.40e-28 53 424 65 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P15922 8.03e-18 29 419 131 547
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
P27644 4.51e-15 207 348 25 170
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q00359 5.07e-15 46 451 48 443
Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1
Q9FY19 5.98e-13 52 428 61 405
Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000548 0.998544 0.000445 0.000160 0.000138 0.000137

TMHMM  Annotations      download full data without filtering help

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