logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001750_02341

You are here: Home > Sequence: MGYG000001750_02341

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola ilei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola ilei
CAZyme ID MGYG000001750_02341
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
880 97727.95 6.3972
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001750 2839699 MAG Sweden Europe
Gene Location Start: 2171;  End: 4813  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 2 215 2.1e-55 0.9398148148148148

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 2.35e-68 1 299 63 349
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 2.88e-66 1 248 69 314
Glycosyl hydrolase family 3 N terminal domain.
PRK03642 PRK03642 5.79e-57 458 860 30 405
putative periplasmic esterase; Provisional
pfam00144 Beta-lactamase 1.80e-43 471 864 1 322
Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.
COG1680 AmpC 6.12e-35 469 864 36 377
CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37542.1 0.0 1 880 108 987
QRO23705.1 0.0 1 880 110 988
ALA72189.1 0.0 2 878 114 990
AII66347.1 0.0 2 878 114 990
QJR54154.1 0.0 2 878 114 990

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6K5J_A 4.19e-55 1 292 79 377
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A 1.24e-49 1 371 119 511
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 3.86e-49 1 371 93 485
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 6.09e-49 1 371 123 515
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3SQL_A 1.55e-46 1 247 87 342
CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 6.78e-49 1 371 119 511
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P77619 5.60e-44 458 860 30 405
Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2
Q8Z4S7 8.43e-43 458 859 30 404
Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella typhi OX=90370 GN=yfeW PE=3 SV=1
B4TR50 1.14e-42 458 859 30 404
Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=yfeW PE=3 SV=1
B5F0K5 1.14e-42 458 859 30 404
Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella agona (strain SL483) OX=454166 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001750_02341.