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CAZyme Information: MGYG000001756_01115

You are here: Home > Sequence: MGYG000001756_01115

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1394 sp900538575
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA1394; UBA1394 sp900538575
CAZyme ID MGYG000001756_01115
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
958 MGYG000001756_5|CGC3 105981.78 4.4507
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001756 2438245 MAG Iceland Europe
Gene Location Start: 142468;  End: 145344  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001756_01115.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 196 427 3.5e-32 0.9702970297029703
CBM13 562 708 4.4e-22 0.7021276595744681
CBM13 716 875 1.1e-17 0.7872340425531915

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.86e-32 155 510 17 340
Pectate lyase [Carbohydrate transport and metabolism].
pfam14200 RicinB_lectin_2 4.52e-17 556 641 8 89
Ricin-type beta-trefoil lectin domain-like.
smart00656 Amb_all 6.97e-16 266 427 40 188
Amb_all domain.
pfam14200 RicinB_lectin_2 4.85e-15 647 746 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 7.82e-15 697 793 1 85
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CDM70399.1 9.22e-215 34 690 32 681
AUO18238.1 2.69e-196 35 701 37 702
CBL17651.1 1.59e-143 2 956 5 895
CBL16867.1 2.50e-132 5 951 9 910
ASR46637.1 7.11e-100 1 530 2 536

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1VBL_A 6.62e-14 266 425 156 330
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3VMV_A 7.75e-13 188 428 16 249
Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
3ZSC_A 5.07e-11 187 395 22 213
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
1PCL_A 9.85e-10 188 425 21 276
ChainA, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27027 2.46e-14 168 514 10 306
Pectin lyase OS=Pseudomonas marginalis OX=298 GN=pnl PE=1 SV=2
Q2TZY0 1.36e-11 188 394 49 234
Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1
B8NBC2 1.36e-11 188 394 49 234
Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1
Q9WYR4 1.43e-11 187 395 49 240
Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1
B1L969 4.46e-11 187 395 47 238
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000365 0.998895 0.000224 0.000173 0.000160 0.000149

TMHMM  Annotations      download full data without filtering help

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