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CAZyme Information: MGYG000001770_01591

You are here: Home > Sequence: MGYG000001770_01591

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900313215
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900313215
CAZyme ID MGYG000001770_01591
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
485 53830.63 8.3018
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001770 3003526 MAG Denmark Europe
Gene Location Start: 4559;  End: 6016  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001770_01591.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 96 445 1.4e-75 0.916923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.27e-73 60 375 72 392
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 7.24e-15 97 375 2 233
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 4.06e-14 66 390 49 344
Probable polygalacturonase
PLN02218 PLN02218 2.64e-13 66 446 64 412
polygalacturonase ADPG
PLN03003 PLN03003 7.99e-11 70 398 24 308
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGK84773.1 8.16e-209 18 481 19 476
QCD42468.1 1.53e-208 42 481 34 473
AND21958.1 1.97e-208 49 483 8 443
AII62903.1 4.34e-208 49 483 30 465
QUT83816.1 4.34e-208 49 483 30 465

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 3.81e-89 44 452 2 420
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 9.53e-72 67 446 42 429
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A 1.22e-15 91 440 31 359
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 6.55e-33 76 446 69 431
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P27644 7.15e-20 225 418 25 231
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
P18192 2.42e-16 91 440 57 385
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
P26509 7.94e-15 91 440 57 385
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1
P15922 1.50e-14 68 392 150 495
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000542 0.960043 0.038586 0.000270 0.000263 0.000239

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001770_01591.