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CAZyme Information: MGYG000001772_01448

You are here: Home > Sequence: MGYG000001772_01448

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-831 sp900550465
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; CAG-831; CAG-831 sp900550465
CAZyme ID MGYG000001772_01448
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
607 MGYG000001772_7|CGC1 66184.27 4.197
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001772 2209907 MAG Denmark Europe
Gene Location Start: 143119;  End: 144942  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001772_01448.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 201 388 6.8e-79 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 4.08e-10 37 120 2 92
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
COG3866 PelB 4.00e-08 162 399 48 288
Pectate lyase [Carbohydrate transport and metabolism].
pfam00041 fn3 1.04e-07 39 114 3 85
Fibronectin type III domain.
smart00656 Amb_all 1.05e-07 210 388 12 186
Amb_all domain.
smart00060 FN3 1.22e-06 37 111 2 83
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL41084.1 3.66e-209 142 605 48 521
QUT78076.1 2.25e-208 142 605 48 523
QDM11673.1 2.25e-208 142 605 48 523
QRQ55767.1 4.52e-208 142 605 48 523
SCV08375.1 4.52e-208 142 605 48 523

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 5.03e-58 151 604 22 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 1.80e-57 151 602 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 9.40e-57 151 602 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q4WL88 5.02e-52 151 602 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 6.96e-52 151 602 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000003 1.000067 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001772_01448.