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CAZyme Information: MGYG000001780_00484

You are here: Home > Sequence: MGYG000001780_00484

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000001780_00484
CAZy Family PL42
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 MGYG000001780_3|CGC1 50485.35 6.5956
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001780 6261722 MAG Denmark Europe
Gene Location Start: 54781;  End: 56094  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL42 42 334 2e-126 0.9966216216216216

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam15892 BNR_4 4.51e-121 60 321 2 272
BNR repeat-containing family member. BNR_4 is a family which carries the unique sequence motif SxDxGxTW which is so characteristic of the repeats of the BNR family, pfam02012. It is unclear whether or not this unit is repeated throughout the sequences of this family, but if it is then the family is likely to be bacterial neuraminidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
EEF91490.1 1.44e-309 7 433 1 427
ALJ58907.1 2.39e-308 7 433 1 427
QUT89977.1 9.71e-308 7 433 1 427
QDO67478.1 9.73e-307 7 435 1 429
QDM11160.1 4.72e-271 31 434 23 426

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MUM_A 1.00e-301 24 435 21 432
GlycosideHydrolase BACINT_00347 [Bacteroides intestinalis DSM 17393]
5MVH_A 1.31e-299 27 433 19 425
GlycosideHydrolase BACCELL_00856 [Bacteroides cellulosilyticus DSM 14838]
5MUK_A 6.40e-268 27 435 19 427
GlycosideHydrolase BT3686 [Bacteroides thetaiotaomicron VPI-5482],5MUL_A Glycoside Hydrolase BT3686 bound to Glucuronic Acid [Bacteroides thetaiotaomicron VPI-5482]
4IRT_A 6.53e-266 31 434 6 409
Crystalstructure of a putative neuraminidase (BACOVA_03493) from Bacteroides ovatus ATCC 8483 at 1.74 A resolution [Bacteroides ovatus ATCC 8483]
7ESK_A 1.95e-39 43 424 23 416
ChainA, L-Rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum],7ESM_A Chain A, L-rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000374 0.998917 0.000252 0.000162 0.000155 0.000149

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001780_00484.