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CAZyme Information: MGYG000001780_01223

You are here: Home > Sequence: MGYG000001780_01223

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000001780_01223
CAZy Family GH10
CAZyme Description Endo-1,4-beta-xylanase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
362 MGYG000001780_7|CGC1 41988.3 9.2883
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001780 6261722 MAG Denmark Europe
Gene Location Start: 23573;  End: 24661  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001780_01223.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 45 357 8.8e-96 0.9702970297029703

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 1.14e-106 50 357 11 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 4.96e-94 85 355 1 263
Glycosyl hydrolase family 10.
COG3693 XynA 6.25e-87 39 359 26 341
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIL76880.1 5.74e-108 19 360 3 356
QNH62462.1 1.93e-105 34 360 29 353
ARS39444.1 3.15e-104 39 360 39 364
AHJ98427.1 1.34e-103 43 360 38 355
QPH40350.1 2.46e-103 43 360 47 363

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7NL2_A 1.22e-67 32 357 1 339
ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069]
6D5C_A 1.11e-64 49 357 31 349
Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]
5OFJ_A 9.98e-63 47 357 17 337
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
6FHE_A 1.41e-62 49 356 21 339
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
5OFK_A 7.81e-62 47 357 17 337
Crystalstructure of CbXyn10C variant E140Q/E248Q complexed with xyloheptaose [Caldicellulosiruptor bescii DSM 6725],5OFL_A Crystal structure of CbXyn10C variant E140Q/E248Q complexed with cellohexaose [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q12603 1.33e-59 20 357 13 351
Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1
P10474 1.38e-59 49 357 53 371
Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celB PE=3 SV=1
G4MTF8 3.24e-58 51 360 46 331
Endo-1,4-beta-xylanase 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL2 PE=3 SV=1
O69231 1.57e-55 47 356 14 329
Endo-1,4-beta-xylanase B OS=Paenibacillus barcinonensis OX=198119 GN=xynB PE=1 SV=1
P45703 2.28e-54 47 358 14 330
Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000176 0.003358 0.996472 0.000020 0.000005 0.000002

TMHMM  Annotations      download full data without filtering help

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