logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001787_01952

You are here: Home > Sequence: MGYG000001787_01952

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900551645
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900551645
CAZyme ID MGYG000001787_01952
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
971 MGYG000001787_65|CGC1 110143.82 4.9996
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001787 3320861 MAG Denmark Europe
Gene Location Start: 428;  End: 3343  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001787_01952.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 24 592 4e-107 0.613031914893617

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 6.97e-64 33 445 14 420
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 4.11e-56 29 431 10 417
beta-D-glucuronidase; Provisional
PRK10340 ebgA 1.70e-49 84 606 111 594
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 8.08e-31 84 425 122 457
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 3.95e-25 314 563 4 244
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT49244.1 0.0 1 970 1 970
QKH85205.1 0.0 23 971 24 972
QCQ56660.1 0.0 23 971 21 969
QCQ34456.1 0.0 23 971 21 969
QLK85043.1 0.0 23 971 21 969

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4YPJ_A 3.54e-71 32 808 10 807
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
5T98_A 7.03e-70 32 806 28 818
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
5T9A_A 1.62e-68 33 809 31 846
Crystalstructure of BuGH2Cwt [Bacteroides uniformis],5T9A_B Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_C Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9A_D Crystal structure of BuGH2Cwt [Bacteroides uniformis],5T9G_A Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_B Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_C Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis],5T9G_D Crystal structure of BuGH2Cwt in complex with Galactoisofagomine [Bacteroides uniformis]
6HPD_A 2.57e-68 26 800 32 796
Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901]
7CWD_A 7.90e-67 32 808 4 801
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 5.51e-98 29 796 3 725
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KN75 1.29e-67 26 800 23 787
Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1
A7LXS9 9.63e-66 33 807 46 847
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
P26257 2.21e-59 29 759 2 706
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1
T2KPJ7 4.69e-57 2 652 24 678
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002345 0.445156 0.551619 0.000398 0.000253 0.000216

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001787_01952.