CAZyme Information: MGYG000001789_01731

Basic Information

• Species: Phocaeicola sp002161565
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161565
• CAZyme ID: MGYG000001789_01731
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
851	MGYG000001789_27|CGC1	96040.78	4.6735

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001789	3544186	MAG	Denmark	Europe

• Gene Location: Start: 13603; End: 16158 Strand: -

Full Sequence      

MKKNFLPFRCYVPMLALAVCWLGCPACSDEAVEPEPSVPQPETTYPDAYQDKVRTQPYPK
TSNELIVNPAPFLVPQAMKTGERLQYALSRTEDFADAEISEPQDGCMYNLHRALDAGTWY
WRFRSTDAEGANPGVWSETYAFEVKAETPVFVTPPFEDFLENAPRVHPRLYCFLNPYIGE
ARQNVTSHPEYRQLTARASIALEADYGAMDLYADAETLRQHATWLYHAYYLTQNERYADK
LVELLDAMLALPPTDTQLFTDNFTTSALTLAHAAVYDLLYGRLTATQRSGAEELMMRALR
HSYQEQCGVEENHIFDNHFWQQNMRILTQAAFLLYDKAEYADEALPILKYYYELWTARAP
ASGFNRDGIWHNGTGYFPANVKTLAYMPALFSYVARFDFLQHPWYRNAGRALAYTNPPDS
KSTGFGDNSENGDQPNRLTAAFADYLARETGDAYAGWYAGECQSLVRQDYELRLYRMCSN
RTYESALPEDAAKMVWYSDAGEVSMHSHLGDAGNDLALSFRSSTFGSGSHTTASQNAFNL
LFKGHDVYRSTGYYQAFADAHNLMSYRHTRAHNTILVNGIGQPYSTKGYGSIVRALGGNH
ISYALGDASHAYCGISDDPMWVNYFAQAGITQTPDNGFGETPLTRYRRHVLMLHPRTVLI
YDELEASEPVRWDWLLHSPVRFDINEAEQVLSTADEADGFYAVTQLFGSSEMDITQTDQF
AVPPATGGAEYPNQWHLTASTDNQPATRYLTLIQVCEAGESPYIIRRDGDTFTCGDWTVE
ACLNASDSPRLVVRHHTEPVVFSYGEESPVIDGVPYLRQDANSSLLYDETDGEYQVMEMT
DRAPIATRKGF

Enzyme Prediction     

No EC number prediction in MGYG000001789_01731.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	508	664	1.1e-49	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	2.03e-75	52	461	6	447	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	3.94e-08	512	677	18	163	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU94214.1	0.0	8	848	5	846
QGT73302.1	0.0	22	848	17	844
CBK68010.1	0.0	22	848	4	831
QUT32653.1	0.0	22	848	17	844
QNL40851.1	0.0	22	848	17	844

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	2.20e-101	52	844	36	864	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	1.15e-98	52	844	36	864	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	8.24e-27	276	678	267	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.33e-25	276	678	267	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000622	0.271608	0.727274	0.000143	0.000186	0.000151

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001789_01731.