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CAZyme Information: MGYG000001789_01790

You are here: Home > Sequence: MGYG000001789_01790

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161565
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161565
CAZyme ID MGYG000001789_01790
CAZy Family GH2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
367 MGYG000001789_29|CGC1 41208.7 6.4939
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001789 3544186 MAG Denmark Europe
Gene Location Start: 5506;  End: 6609  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001789_01790.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 17 353 1.8e-43 0.39228723404255317

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 4.12e-11 66 346 59 348
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam00703 Glyco_hydro_2 1.47e-07 177 282 2 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY36269.1 6.61e-194 1 355 1 355
ALJ61552.1 2.96e-148 22 355 28 361
QUT92878.1 1.82e-146 22 355 28 361
QBJ17536.1 1.36e-142 5 355 4 359
QUT34134.1 5.38e-142 5 355 4 359

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q32JB6 6.06e-06 180 342 244 393
Beta-galactosidase OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=lacZ PE=3 SV=2
B5Z2P7 8.02e-06 180 342 244 393
Beta-galactosidase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) OX=444450 GN=lacZ PE=3 SV=1
Q8X685 8.02e-06 180 342 244 393
Beta-galactosidase OS=Escherichia coli O157:H7 OX=83334 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000551 0.979142 0.019596 0.000278 0.000215 0.000205

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001789_01790.