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CAZyme Information: MGYG000001789_02017

You are here: Home > Sequence: MGYG000001789_02017

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161565
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161565
CAZyme ID MGYG000001789_02017
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
780 MGYG000001789_36|CGC1 84727.65 3.9375
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001789 3544186 MAG Denmark Europe
Gene Location Start: 12149;  End: 14491  Strand: -

Full Sequence      Download help

MPAWAGCRHS  YKLIALNQKI  MKYTNKILLG  ALAVGALSGC  TDDSMLPYDV  GAKPESLSQY60
EYLNNYDVLK  SYVDRTENPN  FKLGIALAAT  DYINGDQVYS  LACSNFDEMT  AGNEMKYASI120
VSNDGAMNFS  TVTSFVDAAR  QAGMTIYGHT  LAWHSQQNNT  YLNSLIAPIV  IPGEAGNGGY180
CMILKNATAS  ANIWDAQTWY  QLPTPLQSGT  TYTLSFMARA  SAAYNDTQIY  LQCSDGGNQE240
YPGGFNVGTE  WQQINFTFTP  TGATVDKIAF  NFGTAAINIY  IDNISLTGGS  ATESLIPNGD300
FEDGTITGWT  GWTPGNFETI  SEDGEGYSEG  GSEPAYDESV  ITSSDFENGI  GSWGGWGGSA360
TRGQSAQGGG  YESDYSFEIV  NPTASANAWD  VQVAWDFAAP  LVQGGTYRLN  MMIKGSVEGS420
ITAGLQRKSD  YAGAGDFPAI  PISTEWTEYN  AEITVNGGGA  DCADRFLFSI  GNYAGTINID480
NITLCYLNPE  GGGGGQTIEM  TPEEKKDTLT  WAMDNWIKGM  MEACGGYVTT  WEAANETVSG540
ADADGDGWYD  LQSATNGDPE  TNFYWQDYLG  NEDYVPIVTK  AAEKYFAEYG  GNPADLKLFV600
NDYNLESWWD  GNQKLKSLIH  WIEVWEANGA  KIDGIGTQMH  VSYILNEADQ  KAQEDAIVNM660
FQLMAATGKL  IKISELDMGI  VEKAFGEGIK  TENVTFDQQL  KMAEFYQFII  EKYFEIIPAA720
QRYGITQWCI  TDSPAESGWR  GGEPVGLWDL  NYSRKPAYGG  FANGLAGEVI  AEPSASVSNE780
780

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Created with Snap3978117156195234273312351390429468507546585624663702741504762GH10
Family Start End Evalue family coverage
GH10 504 762 8.1e-43 0.6798679867986799

CDD Domains      download full data without filtering help

Created with Snap3978117156195234273312351390429468507546585624663702741505758Glyco_10505763Glyco_hydro_10512758XynA82156Glyco_hydro_10148262CBM_4_9
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 3.41e-26 505 758 54 260
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 2.99e-25 505 763 96 310
Glycosyl hydrolase family 10.
COG3693 XynA 2.17e-18 512 758 126 334
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 3.71e-12 82 156 11 85
Glycosyl hydrolase family 10.
pfam02018 CBM_4_9 1.66e-07 148 262 12 119
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Created with Snap397811715619523427331235139042946850754658562466370274121765QDM11106.1|CBM0|CBM4|GH1021765QIU93949.1|CBM0|CBM4|GH1021765QGT73069.1|CBM0|CBM4|GH1021765QUR44907.1|CBM0|CBM4|GH1020768QRQ48288.1|GH10
Hit ID E-Value Query Start Query End Hit Start Hit End
QDM11106.1 1.63e-230 21 765 1 725
QIU93949.1 9.58e-230 21 765 1 725
QGT73069.1 1.92e-229 21 765 1 725
QUR44907.1 2.72e-229 21 765 1 725
QRQ48288.1 3.20e-219 20 768 2 719

PDB Hits      download full data without filtering help

Created with Snap39781171561952342733123513904294685075465856246637027415067584W8L_A5267671US3_A5097671US2_A5067654XUY_A5067581TUX_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4W8L_A 1.78e-11 506 758 106 338
Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis]
1US3_A 6.19e-11 526 767 291 515
Nativexylanase10C from Cellvibrio japonicus [Cellvibrio japonicus]
1US2_A 6.19e-11 509 767 250 515
Xylanase10C(mutant E385A) from Cellvibrio japonicus in complex with xylopentaose [Cellvibrio japonicus]
4XUY_A 8.94e-11 506 765 102 302
Crystalstructure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
1TUX_A 1.19e-10 506 758 101 294
HighResolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus [Thermoascus aurantiacus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3978117156195234273312351390429468507546585624663702741506758sp|O69230|XYNC_PAEBA506765sp|C5J411|XYNC_ASPNG506765sp|O94163|XYNF1_ASPOR526767sp|Q59675|XY10C_CELJA509758sp|Q4P902|XIN1_USTMA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
O69230 3.00e-10 506 758 472 704
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1
C5J411 3.41e-10 506 765 127 327
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger OX=5061 GN=xlnC PE=2 SV=2
O94163 3.41e-10 506 765 125 327
Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF1 PE=1 SV=1
Q59675 3.83e-10 526 767 375 599
Endo-beta-1,4-xylanase Xyn10C OS=Cellvibrio japonicus OX=155077 GN=xyn10C PE=1 SV=2
Q4P902 3.87e-10 509 758 139 332
Endo-1,4-beta-xylanase UM03411 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_03411 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.005422 0.182772 0.811669 0.000104 0.000032 0.000013

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001789_02017.