CAZyme Information: MGYG000001789_02442

Basic Information

• Species: Phocaeicola sp002161565
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161565
• CAZyme ID: MGYG000001789_02442
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
813		91155.63	5.9635

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001789	3544186	MAG	Denmark	Europe

• Gene Location: Start: 8134; End: 10575 Strand: -

Full Sequence      

MKNYLLTLMSGLVALGVTSCGKPAYTQPDAPIQEVPFTQVHLSDSFWLPRIETNRTVSIP
SAFKECEKNGRFDNFAIAAGLKKGEHRGDFSFDDTDPYKVIEGASYSLAVKYDPQLDHYL
DSVINIIAAAQEPDGYLTTCVTNKCYRLSGWWGRSKWEKINSHELYNSGHMYEAAVAHYR
ATGKRTFLDVAIKNADLVCKTFGPKEGQIHRPSGHPIVEMALCKLYKVTGDRKYLDMAKY
FVEETGRGTDGHKLSEYSQDHKPILQQDEIVGHAVRAGYLYSGVADVAALTHDTAYFHAL
TRLWDNLVSKKLYITGGMGSRAQGEGFGPNYELQNHTAYCETCASIANVYWNHRMFLATG
ESKYIDVLERALYNGVISGVSLSGDKFFYDNPLESMGQHERQRWFGCACCPGNVTRFIAS
VPNYAYATQQNDIYVNLYIQGKAEMQLADSTKVTLEQTTGYPWNGKIAIKVTPDKEGEFA
IRLRIPSWAKSAPVASDLYAYTDAPKKYTLKVNGSSARAAEGDGYETLVRSWKAGDVIEL
DLPMDVRRIQANDSVEIDRGMLALERGPIVFCLEGKDQPDSTVFNKFIAPDTKIDAAFDA
SLLNGVMVLSGAAKEVERDGTVNDVTFRAIPYSTWNNRGADQMEVWIPEAKEYATPTPEP
TIASKAQTFSIQAPIQKDAPESASVISYAWGVNDQWEPRRSSDTSKPYHYWWLKEGTEES
LAYEFDQPYTVSNVQVYWLDFDHYDGNFRVPQSWKLYYKVGNTWKEVEALGEYGVKKDCY
NSLDFKPVKTTGLKIAAQLQPGESGGIIEWKVK

Enzyme Prediction     

No EC number prediction in MGYG000001789_02442.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	40	572	3.9e-212	0.9980916030534351

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	0.0	39	572	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.27e-172	31	651	2	589	Uncharacterized conserved protein, DUF1680 family [Function unknown].
cd04791	LanC_SerThrkinase	0.006	179	239	99	169	Lanthionine synthetase C-like domain associated with serine/threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
COG1331	YyaL	0.008	166	244	411	499	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQY38942.1	0.0	1	812	1	810
ABR38820.1	0.0	1	812	1	810
QUT60192.1	0.0	1	812	1	810
QEW34697.1	0.0	1	812	1	810
QQY42147.1	0.0	1	812	1	810

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6EX6_A	1.23e-215	31	648	6	624	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QJY_A	1.54e-151	38	649	14	647	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	1.63e-147	38	649	14	647	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A	1.17e-109	10	651	23	698	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
3WRE_A	4.33e-109	74	646	56	655	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	2.37e-108	74	646	56	655	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000061	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001789_02442.