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CAZyme Information: MGYG000001792_01170

You are here: Home > Sequence: MGYG000001792_01170

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA11452;
CAZyme ID MGYG000001792_01170
CAZy Family GH163
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
763 86876.57 9.0888
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001792 3531580 MAG Denmark Europe
Gene Location Start: 4219;  End: 6510  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001792_01170.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH163 223 508 7.9e-37 0.9800796812749004

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16126 DUF4838 5.01e-36 213 509 1 263
Domain of unknown function (DUF4838). This family consists of several uncharacterized proteins found in various Bacteroides and Chloroflexus species. The function of this family is unknown.
cd09618 CBM9_like_2 8.77e-09 617 737 41 170
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized subfamily are typically found at the N-terminus of longer proteins that lack additional annotation with domain footprints.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDU96994.1 1.27e-130 8 743 10 748
QEG42594.1 1.37e-114 18 745 17 747
QDV26494.1 5.63e-113 39 721 38 725
QDV12958.1 1.01e-91 34 725 264 958
QDS93999.1 1.01e-86 44 751 285 993

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000364 0.998872 0.000241 0.000159 0.000160 0.000158

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001792_01170.