CAZyme Information: MGYG000001805_00411

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella
• CAZyme ID: MGYG000001805_00411
• CAZy Family: GT2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1258	MGYG000001805_7|CGC2	142171.12	5.5877

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001805	1812910	MAG	Denmark	Europe

• Gene Location: Start: 41170; End: 44946 Strand: +

Full Sequence      

MRGSIDCFLPCGDFASVNNTLRQLRGSRMIRHINLLVTQAFAMGHAVPDGCSFIVVDGLL
SSSTMRSIAENVMADYALVFLKDVPVSLGQYAIQRMMRVASETDASMVYADRLSVIEGEA
FPHPVTDWQEGSLRDDFDFGSVVMLKASLLKNFADDIDDSDYQYAGWYELWLYLSRQGGL
FHLNEFLYTENERDMRASGIRQFDYVNPANRAVQIEMERVVTAHLAAVGALVDTTYYTEP
DFSEQDFSVEATVVIPVRNREKTICDAVDSALSQKTTFPFNVIVVDNHSTDGTTALLDGY
SDNRLIHIIPRRSDLGIGGCWNVAVDDCRCGRFAVQLDSDDLYSSPSTLQTIVDAFYEQR
AAMIIGSYRMCDFDLNTLPPGLISHSEWTDKNGCNNALRINGLGAPRAFFTPLLRQIRFP
NTSYGEDYALGLAFSRRYRIGRIYTELYLCRRWGGNSDAALSVDKVNANNLYKDRLRTIE
LMARKKMNAGDGMTHGDDSLWRFFSRQLETWDLARRSFRSLQDVQVKELADPSSAMLSLG
VQHNPARIVSTGASVAKEDVSHRPCFLCHDNRPAEQMAKRFDGEFEILVNPYPILPVHFT
IPSRRHQPQRISGNYVRMLRFVETYPDMMAFYNGPECGASAPDHLHFQAGTSRRLPLLAE
WHKFRRSLIKLYSLNNENDISLVTGWVCPALLIRCADIEAGDRLFRRVFDALPLREGQSE
PMMNIITWIDTGHFMTVIFPRWKHRPACYYAKDEDKMLVSPGALDMGGLVITPRKEDFER
MTMAAAVGILREVSLPADEMQTVVERIKEVSPVDESIFSDGCEPCVQVGIVSASSISFML
NGEFEAKGEVMTGRQQVAFSEGGILWNGNIYRELTFTPNGENSSFTLDNVTIGVNFHWQR
QEAQTFQGTLRLVVEAEKVCAINSLPVEDYLVSVISSEMKATSSIEFLKAHAVISRSWLL
AQIEHRNRQDTGGSGFFSFVKKDDELIRWYDRDDHTIFDVCADDHCQRYQGITKATNIHV
EQAVKDTRGQILMSGGEICDARFSKCCGGVTEEFQYCWENRPKPYLVALRDTDDKQATVP
DLTDEAEADRWIRSCPESYCNTTDKKTLSQVLNDYDRETSDFYRWHVEYTQEQLSALIQK
KLNIDFGQIIDLVPVERGRSGRICKLRIIGTKRTFTIGKELEIRRTLSETHLYSSAFVVD
KFGDDGGAPSRFVITGAGWGHGVGLCQIGAAVMGERGCKYNEILLHYYRGAEIRKIYS

Enzyme Prediction     

No EC number prediction in MGYG000001805_00411.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	252	381	3.5e-19	0.7529411764705882

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16269	DUF4922	3.21e-95	614	801	1	188	Domain of unknown function (DUF4922). This family consists of uncharacterized proteins around 310 residues in length and is mainly found in various Bacteroides and Parabacteroides species. Several members are annotated as putative glycosyltransferases, but the specific function of this family is still unknown.
TIGR02669	SpoIID_LytB	2.34e-50	921	1253	2	265	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]
COG2385	SpoIID	1.31e-45	831	1256	57	393	Peptidoglycan hydrolase (amidase) enhancer domain [Cell wall/membrane/envelope biogenesis].
TIGR02870	spore_II_D	6.23e-37	921	1256	68	338	stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination]
pfam08486	SpoIID	1.92e-29	915	1033	1	100	Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS84357.1	0.0	1	1258	1	1253
ADE82754.1	0.0	1	1258	1	1224
QVJ80566.1	0.0	1	1258	1	1224
QNT65264.1	0.0	1	1258	1	1260
QYR11045.1	0.0	5	1258	4	1246

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4RWR_A	2.57e-14	910	1254	51	318	2.1Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis],4RWR_B 2.1 Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis]
5I1T_A	1.17e-10	925	1257	64	330	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]
5TXU_A	1.40e-10	925	1257	88	354	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q02113	5.99e-12	931	1253	422	702	Amidase enhancer OS=Bacillus subtilis (strain 168) OX=224308 GN=lytB PE=1 SV=1
C0QYX7	1.15e-11	906	1253	88	351	Uncharacterized protein BHWA1_00569 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=BHWA1_00569 PE=1 SV=1
P07372	2.19e-08	921	1253	71	329	Stage II sporulation protein D OS=Bacillus subtilis (strain 168) OX=224308 GN=spoIID PE=4 SV=1
P13251	2.21e-08	921	1253	72	330	Stage II sporulation protein D OS=Bacillus amyloliquefaciens OX=1390 GN=spoIID PE=4 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000043	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001805_00411.