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CAZyme Information: MGYG000001809_02911
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Eisenbergiella; | |||||||||||
| CAZyme ID | MGYG000001809_02911 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2612; End: 4123 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 116 | 481 | 5.5e-68 | 0.9476923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 6.22e-71 | 8 | 384 | 6 | 397 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 3.89e-21 | 188 | 447 | 54 | 288 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 1.38e-16 | 89 | 413 | 24 | 309 | Probable polygalacturonase At3g15720 |
| PLN03010 | PLN03010 | 1.36e-14 | 189 | 389 | 141 | 314 | polygalacturonase |
| PLN02218 | PLN02218 | 2.04e-14 | 82 | 465 | 61 | 410 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AIQ57019.1 | 5.93e-198 | 3 | 500 | 14 | 513 |
| AIQ45845.1 | 9.37e-197 | 1 | 484 | 12 | 498 |
| AIQ51483.1 | 1.38e-193 | 1 | 484 | 12 | 498 |
| AFC29187.1 | 1.17e-181 | 1 | 498 | 12 | 511 |
| AFH61358.1 | 1.66e-181 | 1 | 498 | 12 | 511 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2UVE_A | 3.01e-41 | 9 | 440 | 47 | 534 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 5OLP_A | 1.26e-33 | 89 | 488 | 45 | 452 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 1.14e-30 | 84 | 465 | 19 | 412 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 7E56_A | 3.37e-12 | 186 | 422 | 67 | 284 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
| 6KVE_A | 3.58e-12 | 186 | 422 | 75 | 292 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15922 | 2.79e-43 | 2 | 413 | 35 | 506 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| A7PZL3 | 2.52e-41 | 94 | 462 | 68 | 423 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P20041 | 1.54e-17 | 99 | 403 | 63 | 410 | Polygalacturonase OS=Ralstonia solanacearum OX=305 GN=pglA PE=1 SV=1 |
| P27644 | 4.44e-17 | 205 | 453 | 3 | 250 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| Q9LW07 | 1.53e-15 | 90 | 413 | 25 | 309 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000064 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |