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CAZyme Information: MGYG000001810_01755

You are here: Home > Sequence: MGYG000001810_01755

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp002314255
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp002314255
CAZyme ID MGYG000001810_01755
CAZy Family CBM40
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1650 MGYG000001810_21|CGC2 178237.71 3.9738
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001810 2943094 MAG Denmark Europe
Gene Location Start: 32661;  End: 37613  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001810_01755.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH33 439 874 1.1e-94 0.9532163742690059
CBM40 71 227 1.6e-30 0.8715083798882681
CBM40 257 414 8.2e-30 0.888268156424581
CBM32 1022 1152 1.4e-25 0.9435483870967742

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd15482 Sialidase_non-viral 3.46e-82 438 879 3 339
Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
pfam00754 F5_F8_type_C 1.70e-22 1023 1152 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
COG4409 NanH 1.38e-20 244 872 68 704
Neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis].
cd00057 FA58C 4.44e-16 1021 1135 11 129
Substituted updates: Jan 31, 2002
pfam13088 BNR_2 1.27e-14 617 865 68 280
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTZ29921.1 3.12e-129 224 957 636 1408
QWN60670.1 1.12e-128 224 971 726 1511
QUF61972.1 1.12e-128 224 971 726 1511
QTZ59287.1 2.09e-128 224 957 726 1498
SQF82073.1 2.84e-128 224 971 726 1511

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5TSP_A 3.99e-102 428 888 3 452
Crystalstructure of the catalytic domain of Clostridium perfringens neuraminidase (NanI) in complex with a CHES [Clostridium perfringens ATCC 13124],5TSP_B Crystal structure of the catalytic domain of Clostridium perfringens neuraminidase (NanI) in complex with a CHES [Clostridium perfringens ATCC 13124]
2VK5_A 1.45e-101 428 888 2 451
TheStructure Of Clostridium Perfringens Nani Sialidase And Its Catalytic Intermediates [Clostridium perfringens],2VK6_A The Structure Of Clostridium Perfringens Nani Sialidase And Its Catalytic Intermediates [Clostridium perfringens],2VK7_A The Structure Of Clostridium Perfringens Nani Sialidase And Its Catalytic Intermediates [Clostridium perfringens],2VK7_B The Structure Of Clostridium Perfringens Nani Sialidase And Its Catalytic Intermediates [Clostridium perfringens]
2BF6_A 4.62e-101 428 885 2 448
AtomicResolution Structure of the bacterial sialidase NanI from Clostridium perfringens in complex with alpha-Sialic Acid (Neu5Ac). [Clostridium perfringens]
2VVZ_A 3.19e-97 428 902 1 488
Structureof the catalytic domain of Streptococcus pneumoniae sialidase NanA [Streptococcus pneumoniae],2VVZ_B Structure of the catalytic domain of Streptococcus pneumoniae sialidase NanA [Streptococcus pneumoniae]
3H72_A 3.21e-96 428 887 3 477
Crystalstructure of Streptococcus pneumoniae D39 neuraminidase A precursor (NanA) in complex with NANA [Streptococcus pneumoniae R6],3H72_B Crystal structure of Streptococcus pneumoniae D39 neuraminidase A precursor (NanA) in complex with NANA [Streptococcus pneumoniae R6],3H73_A Crystal structure of Streptococcus pneumoniae D39 neuraminidase A precursor (NanA) in complex with DANA [Streptococcus pneumoniae R6],3H73_B Crystal structure of Streptococcus pneumoniae D39 neuraminidase A precursor (NanA) in complex with DANA [Streptococcus pneumoniae R6]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P29767 6.76e-113 260 941 212 882
Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1
P62576 1.12e-100 223 1007 103 889
Sialidase A OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=nanA PE=1 SV=1
P62575 1.12e-100 223 1007 103 889
Sialidase A OS=Streptococcus pneumoniae OX=1313 GN=nanA PE=1 SV=1
Q27701 8.60e-58 258 888 103 760
Anhydrosialidase OS=Macrobdella decora OX=6405 PE=1 SV=1
Q02834 4.20e-28 442 1156 60 645
Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000436 0.992481 0.006373 0.000248 0.000232 0.000207

TMHMM  Annotations      download full data without filtering help

start end
1625 1644