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CAZyme Information: MGYG000001810_02583

You are here: Home > Sequence: MGYG000001810_02583

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp002314255
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp002314255
CAZyme ID MGYG000001810_02583
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
643 72255.06 4.3517
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001810 2943094 MAG Denmark Europe
Gene Location Start: 6121;  End: 8052  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001810_02583.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 324 630 6.9e-34 0.7837837837837838

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 1.45e-65 332 638 19 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 2.74e-38 328 638 116 418
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 2.71e-24 313 635 1 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
smart00636 Glyco_18 4.31e-24 335 629 22 333
Glyco_18 domain.
pfam00704 Glyco_hydro_18 1.25e-21 384 629 71 306
Glycosyl hydrolases family 18.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRT30243.1 1.81e-285 72 643 78 645
QEI31514.1 3.64e-285 72 643 78 645
QHB24012.1 3.64e-285 72 643 78 645
CBL24889.1 3.68e-277 121 643 130 652
QEK19554.1 5.29e-248 50 643 83 664

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JH8_A 1.66e-18 328 640 7 312
Crystalstructure of chitinase from Chromobacterium violaceum ATCC 12472 [Chromobacterium violaceum ATCC 12472]
3CZ8_A 1.71e-18 347 627 41 308
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4S3K_A 7.41e-16 339 638 135 423
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
4S3J_A 5.26e-14 361 640 155 423
Crystalstructure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_B Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_C Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876]
4Q6T_A 7.49e-12 365 638 59 335
Thecrystal structure of a class V chitininase from Pseudomonas fluorescens Pf-5 [Pseudomonas protegens Pf-5]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O05495 2.71e-18 347 637 133 411
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P37531 3.88e-14 395 638 186 419
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
P0DPJ9 2.84e-13 361 640 154 422
Cortical fragment-lytic enzyme OS=Bacillus anthracis OX=1392 GN=sleL PE=2 SV=1
Q9K3E4 1.56e-12 361 640 154 422
Cortical fragment-lytic enzyme OS=Bacillus cereus OX=1396 GN=sleL PE=1 SV=1
O31682 1.20e-10 311 533 7 214
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999696 0.000301 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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56 78