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CAZyme Information: MGYG000001811_00149

You are here: Home > Sequence: MGYG000001811_00149

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA11774;
CAZyme ID MGYG000001811_00149
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2786 315608.58 4.5989
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001811 2039620 MAG Denmark Europe
Gene Location Start: 600;  End: 8960  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001811_00149.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 1.03e-75 1420 1941 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 9.99e-26 2040 2271 401 635
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG0827 YtxK 4.61e-10 1269 1397 219 341
Adenine-specific DNA methylase [Replication, recombination and repair].
cd18011 DEXDc_RapA 5.46e-09 1887 1946 1 62
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
smart00487 DEXDc 7.62e-09 1885 1988 7 110
DEAD-like helicases superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 1131 2639 1556 3151
QIW86704.1 0.0 1131 2639 1624 3219
QIW86628.1 0.0 1131 2639 1624 3219
AEY69616.1 0.0 1120 2698 1689 3353
AXF51455.1 1.01e-318 1120 2675 1782 3423

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 1.56e-33 1117 2499 23 1619
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001811_00149.