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CAZyme Information: MGYG000001821_01277

You are here: Home > Sequence: MGYG000001821_01277

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; UMGS1865;
CAZyme ID MGYG000001821_01277
CAZy Family GH10
CAZyme Description Anti-sigma-I factor RsgI6
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
449 53007.91 5.3277
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001821 2502425 MAG Denmark Europe
Gene Location Start: 24625;  End: 25974  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001821_01277.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 54 390 6.1e-48 0.9735973597359736

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 9.31e-36 98 389 3 263
Glycosyl hydrolase family 10.
COG3693 XynA 3.14e-28 52 393 25 341
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 2.92e-26 78 391 24 310
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW04637.1 1.20e-109 21 438 34 435
QIP12711.1 8.40e-95 24 449 37 445
AHF89766.1 1.91e-92 21 438 23 427
AXE20297.1 3.80e-92 20 437 33 429
QHV94149.1 5.86e-92 21 443 34 439

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D88_A 4.45e-36 12 439 38 413
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
7D89_A 1.10e-34 12 439 38 413
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
3NIY_A 1.28e-19 79 395 48 338
Crystalstructure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NIY_B Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NJ3_A Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1],3NJ3_B Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1]
1VBR_A 1.99e-19 79 395 32 322
Crystalstructure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBR_B Crystal structure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBU_A Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima],1VBU_B Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima]
4L4O_A 2.45e-19 71 394 7 339
Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DH97 1.30e-25 18 429 380 737
Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
A0A1P8AWH8 5.08e-15 8 447 550 938
Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1
P23556 2.02e-12 128 389 79 339
Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynA PE=1 SV=1
P40943 6.97e-12 58 389 54 403
Endo-1,4-beta-xylanase OS=Geobacillus stearothermophilus OX=1422 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000074 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001821_01277.