logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001825_00539

You are here: Home > Sequence: MGYG000001825_00539

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; TANB77; CAG-508; CAG-269;
CAZyme ID MGYG000001825_00539
CAZy Family GT2
CAZyme Description D-alanine--poly(phosphoribitol) ligase subunit 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1938 221035.43 6.6814
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001825 1360030 MAG Denmark Europe
Gene Location Start: 54;  End: 5870  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001825_00539.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12467 PRK12467 0.0 50 1517 656 2160
peptide synthase; Provisional
PRK05691 PRK05691 0.0 50 1525 1273 2781
peptide synthase; Validated
PRK12316 PRK12316 0.0 506 1518 51 1082
peptide synthase; Provisional
PRK12316 PRK12316 0.0 50 1519 2146 3621
peptide synthase; Provisional
PRK12467 PRK12467 7.40e-179 506 1490 51 1066
peptide synthase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 1.93e-184 54 1525 1163 2667
AFZ04852.1 2.15e-138 648 1529 287 1192
BAY90071.1 1.20e-123 694 1542 327 1201
BAY30132.1 1.72e-119 656 1517 285 1177
BAZ00088.1 3.99e-119 656 1517 285 1175

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MFZ_A 5.25e-216 37 1533 331 1810
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6MFY_A 1.27e-201 37 1437 331 1715
Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
6P1J_A 4.32e-122 505 1434 6 964
Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae]
5U89_A 4.97e-107 54 934 174 1076
Crystalstructure of a cross-module fragment from the dimodular NRPS DhbF [Geobacillus sp. Y4.1MC1]
2VSQ_A 6.52e-101 499 1518 8 1037
Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C064 8.92e-284 17 1517 575 2074
Gramicidin S synthase 2 OS=Brevibacillus brevis OX=1393 GN=grsB PE=1 SV=2
P0C063 4.15e-283 17 1517 575 2074
Gramicidin S synthase 2 OS=Aneurinibacillus migulanus OX=47500 GN=grsB PE=3 SV=2
O68008 1.87e-279 54 1526 603 2076
Bacitracin synthase 3 OS=Bacillus licheniformis OX=1402 GN=bacC PE=3 SV=1
O68007 1.73e-272 46 1524 652 2133
Bacitracin synthase 2 OS=Bacillus licheniformis OX=1402 GN=bacB PE=3 SV=1
O30408 1.12e-268 27 1523 585 2082
Tyrocidine synthase 2 OS=Brevibacillus parabrevis OX=54914 GN=tycB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000070 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001825_00539.