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CAZyme Information: MGYG000001831_01138

You are here: Home > Sequence: MGYG000001831_01138

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species TF01-11 sp000436755
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; TF01-11; TF01-11 sp000436755
CAZyme ID MGYG000001831_01138
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
736 MGYG000001831_15|CGC1 82823.76 10.318
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001831 3856267 MAG Denmark Europe
Gene Location Start: 18335;  End: 20545  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001831_01138.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 8.93e-17 401 631 45 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 3.45e-06 43 104 1 54
Bacterial SH3 domain.
pfam12733 Cadherin-like 5.31e-06 670 735 11 88
Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHQ61172.1 2.34e-159 10 731 10 762
BCN29841.1 3.92e-153 45 735 42 888
BCJ97942.1 2.01e-135 36 735 152 906
BCJ93456.1 7.39e-135 45 735 151 894
ABX43817.1 9.02e-133 82 735 582 1278

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PI8_A 1.52e-06 448 601 59 198
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 2.74e-06 448 601 59 198
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39848 3.49e-08 404 631 679 879
Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1
Q8CPQ1 1.17e-07 356 632 1086 1335
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
O33635 2.65e-07 356 632 1086 1335
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 2.65e-07 356 632 1086 1335
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.008112 0.816915 0.174028 0.000358 0.000292 0.000285

TMHMM  Annotations      download full data without filtering help

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