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CAZyme Information: MGYG000001833_00330

You are here: Home > Sequence: MGYG000001833_00330

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; UMGS1441;
CAZyme ID MGYG000001833_00330
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
788 MGYG000001833_6|CGC1 87387.13 4.9495
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001833 2107204 MAG Denmark Europe
Gene Location Start: 37034;  End: 39400  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001833_00330.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 88 280 2.8e-68 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17957 Big_7 3.11e-07 473 536 1 67
Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes.
COG3866 PelB 1.26e-05 1 312 1 303
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 3.96e-05 90 270 3 172
Amb_all domain.
pfam00544 Pec_lyase_C 5.48e-04 127 269 57 202
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QYR21100.1 9.66e-219 30 787 46 832
QGH35978.1 2.10e-211 27 788 36 760
AWV33235.1 1.36e-210 30 787 53 839
AIQ73887.1 2.26e-210 30 788 47 834
QNF31079.1 2.15e-201 1 787 1 748

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3PDG_A 8.50e-08 473 555 2 86
ChainA, Fibronectin(III)-like module [Acetivibrio thermocellus ATCC 27405]
3PDD_A 5.55e-07 473 555 2 86
ChainA, Glycoside hydrolase, family 9 [Acetivibrio thermocellus ATCC 27405]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 3.13e-58 30 466 20 415
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
A1DPF0 2.78e-56 30 466 21 419
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 1.87e-55 30 466 20 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 2.64e-55 30 466 21 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q0CLG7 3.55e-55 30 466 20 418
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000271 0.999035 0.000195 0.000157 0.000154 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001833_00330.