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CAZyme Information: MGYG000001833_01368
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; UMGS1441; | |||||||||||
| CAZyme ID | MGYG000001833_01368 | |||||||||||
| CAZy Family | CBM77 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1515; End: 3959 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL9 | 404 | 769 | 3.1e-57 | 0.7973333333333333 |
| CBM77 | 56 | 143 | 9.5e-17 | 0.8058252427184466 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam18283 | CBM77 | 9.31e-15 | 56 | 151 | 17 | 108 | Carbohydrate binding module 77. This domain is the non-catalytic carbohydrate binding module 77 (CBM77) present in Ruminococcus flavefaciens. CBMs fulfil a critical targeting function in plant cell wall depolymerisation. In CBM77, a cluster of conserved basic residues (Lys1092, Lys1107 and Lys1162) confer calcium-independent recognition of homogalacturonan. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBI14069.1 | 4.25e-190 | 220 | 814 | 34 | 606 |
| CBZ48778.1 | 1.70e-189 | 220 | 814 | 34 | 606 |
| BAK28435.1 | 1.70e-189 | 220 | 814 | 34 | 606 |
| QKI00169.1 | 1.70e-189 | 220 | 814 | 34 | 606 |
| QWX86240.1 | 1.70e-189 | 220 | 814 | 34 | 606 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1RU4_A | 4.79e-15 | 399 | 746 | 26 | 298 | ChainA, Pectate lyase [Dickeya chrysanthemi] |
| 5FU5_A | 3.41e-08 | 72 | 153 | 36 | 113 | Thecomplexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition [Ruminococcus flavefaciens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C1A6 | 3.10e-14 | 488 | 746 | 134 | 323 | Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1 |
| P0C1A7 | 3.10e-14 | 399 | 746 | 51 | 323 | Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.003183 | 0.019143 | 0.977596 | 0.000017 | 0.000028 | 0.000021 |
