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CAZyme Information: MGYG000001833_01491

You are here: Home > Sequence: MGYG000001833_01491

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; UMGS1441;
CAZyme ID MGYG000001833_01491
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1311 142988.35 4.4454
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001833 2107204 MAG Denmark Europe
Gene Location Start: 9294;  End: 13229  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001833_01491.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 946 1277 2.8e-106 0.872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07523 Big_3 7.72e-08 245 306 4 67
Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
pfam07523 Big_3 2.68e-07 497 564 1 67
Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
pfam07523 Big_3 2.43e-05 412 485 1 67
Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
pfam13229 Beta_helix 4.01e-04 1027 1213 1 142
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam14592 Chondroitinas_B 5.12e-04 965 1068 3 107
Chondroitinase B. This family includes chondroitinases. These enzymes cleave the glycosaminoglycan dermatan sulfate.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANW97669.1 4.09e-213 5 1311 15 1228
AGI38277.1 2.23e-212 5 1311 15 1228
ANX00231.1 2.23e-212 5 1311 15 1228
AGC67199.1 2.23e-212 5 1311 15 1228
BAC87940.1 8.64e-212 5 1311 15 1228

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 3.21e-34 950 1232 18 293
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 1.02e-11 948 1216 4 303
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 1.37e-63 571 1288 33 687
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 4.64e-34 950 1232 43 318
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 2.79e-33 950 1232 43 318
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000233 0.999150 0.000159 0.000168 0.000146 0.000136

TMHMM  Annotations      download full data without filtering help

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