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CAZyme Information: MGYG000001835_01356

You are here: Home > Sequence: MGYG000001835_01356

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp000432735
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp000432735
CAZyme ID MGYG000001835_01356
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
518 MGYG000001835_14|CGC1 56481.55 4.5963
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001835 3299974 MAG Denmark Europe
Gene Location Start: 40260;  End: 41816  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 109 300 1.2e-76 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 2.13e-08 45 340 17 305
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 3.31e-06 119 300 12 186
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AAO79221.1 6.29e-278 20 515 15 520
QMW86468.1 6.29e-278 20 515 15 520
QUT69796.1 5.14e-277 20 515 15 520
QUT41971.1 2.96e-276 20 515 15 520
ALJ43635.1 3.44e-275 20 515 15 520

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 5.00e-49 54 514 18 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 1.87e-47 54 514 18 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 4.98e-44 54 514 19 419
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q0CLG7 9.37e-44 54 514 18 418
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B0XMA2 2.54e-43 54 514 19 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000008 0.005247 0.994757 0.000002 0.000003 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001835_01356.