logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001837_01115

You are here: Home > Sequence: MGYG000001837_01115

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA737;
CAZyme ID MGYG000001837_01115
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
639 MGYG000001837_42|CGC1 73581.03 5.009
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001837 1602907 MAG Denmark Europe
Gene Location Start: 4713;  End: 6632  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001837_01115.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 199 631 6.3e-85 0.8531746031746031
CBM67 9 163 1.4e-21 0.8409090909090909

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 5.54e-32 300 631 5 338
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531 Bac_rhamnosid_N 2.75e-09 36 159 1 132
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam02837 Glyco_hydro_2_N 7.90e-06 48 95 92 134
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10340 ebgA 4.07e-04 33 95 117 178
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3408 GDB1 7.20e-04 341 517 288 468
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBH20286.1 2.49e-177 9 632 9 670
QCT01521.1 7.45e-171 22 633 41 670
AYQ75662.1 1.46e-170 22 632 20 646
QBE96895.1 7.71e-170 5 632 4 660
QMW79864.1 1.54e-169 5 632 4 660

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 3.77e-20 267 625 503 868
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
4XHC_A 2.99e-09 303 625 211 534
ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000066 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001837_01115.