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CAZyme Information: MGYG000001840_00841

You are here: Home > Sequence: MGYG000001840_00841

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes; Bacilli; RF39; UBA660; UMGS2016;
CAZyme ID MGYG000001840_00841
CAZy Family CBM50
CAZyme Description Cell division suppressor protein YneA
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
340 37531.69 7.0176
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001840 1212195 MAG Denmark Europe
Gene Location Start: 1210;  End: 2232  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001840_00841.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM50 80 122 5.9e-18 0.975
CBM50 136 178 1.7e-17 0.975
CBM50 192 234 1.7e-17 0.975
CBM50 248 290 7.7e-17 0.975

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 3.05e-44 79 289 332 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 1.10e-39 136 340 333 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK10783 mltD 8.94e-24 167 295 320 452
membrane-bound lytic murein transglycosylase D; Provisional
PRK10783 mltD 1.47e-19 111 231 320 444
membrane-bound lytic murein transglycosylase D; Provisional
PRK10783 mltD 6.98e-18 223 335 320 441
membrane-bound lytic murein transglycosylase D; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QVN27915.1 1.79e-48 79 340 9 296
ACL69398.1 7.84e-48 80 340 96 357
ASR40346.1 2.84e-47 72 340 389 706
ARW06011.1 2.23e-45 79 340 28 331
ATO29781.1 2.23e-45 79 340 28 331

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4UZ2_A 7.21e-12 247 291 4 48
Crystalstructure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ2_D Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4UZ3_A Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_B Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8],4UZ3_C Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose [Thermus thermophilus HB8]
4XCM_A 1.88e-10 247 291 4 48
Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8]
4B8V_A 3.20e-09 80 215 44 197
ChainA, Extracellular Protein 6 [Fulvia fulva],4B9H_A Chain A, Extracellular Protein 6 [Fulvia fulva]
5K2L_A 2.12e-06 247 290 4 48
Crystalstructure of LysM domain from Volvox carteri chitinase [Volvox carteri f. nagariensis],5YZK_A Solution structure of LysM domain from a chitinase derived from Volvox carteri [Volvox carteri f. nagariensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O07532 3.42e-42 79 340 28 350
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
O31852 3.85e-37 79 340 28 268
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
P39046 1.89e-28 80 338 338 662
Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1
P37710 5.89e-24 80 340 431 736
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
P54421 1.08e-23 194 340 30 192
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001840_00841.