logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001850_01959

You are here: Home > Sequence: MGYG000001850_01959

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; QALW01; UMGS1322;
CAZyme ID MGYG000001850_01959
CAZy Family GT84
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2003 226036.55 7.5072
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001850 2350438 MAG Denmark Europe
Gene Location Start: 3489;  End: 9500  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT84 1128 1336 6.2e-70 0.986046511627907

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd11756 GH94N_ChvB_NdvB_1_like 6.28e-44 1823 1971 3 157
First GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains. The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This first of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants.
pfam06165 Glyco_transf_36 2.98e-32 1845 1964 1 123
Glycosyltransferase family 36. The glycosyltransferase family 36 includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-). Many members of this family contain two copies of this domain.
COG3459 COG3459 5.94e-23 1816 1964 261 416
Cellobiose phosphorylase [Carbohydrate transport and metabolism].
pfam10091 Glycoamylase 6.98e-17 1128 1323 1 201
Putative glucoamylase. The structure of UniProt:Q5LIB7 has an alpha/alpha toroid fold and is similar structurally to a number of glucoamylases. Most of these structural homologs are glucoamylases, involved in breaking down complex sugars (e.g. starch). The biologically relevant state is likely to be monomeric. The putative active site is located at the centre of the toroid with a well defined large cavity.
pfam06165 Glyco_transf_36 1.22e-16 1423 1610 48 246
Glycosyltransferase family 36. The glycosyltransferase family 36 includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-). Many members of this family contain two copies of this domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AAO36920.1 1.52e-213 167 1963 300 2192
AVP54577.1 3.98e-213 167 1963 300 2195
AFK86181.1 9.91e-213 134 1960 304 2210
AST58113.1 1.85e-212 134 1960 303 2210
AVX30049.1 6.22e-212 135 1967 264 2118

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P20471 3.35e-145 133 1899 286 2127
Cyclic beta-(1,2)-glucan synthase NdvB OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ndvB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000088 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
235 257
261 283
608 630
634 656
742 764