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CAZyme Information: MGYG000001857_00242

You are here: Home > Sequence: MGYG000001857_00242

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Succinivibrio;
CAZyme ID MGYG000001857_00242
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
488 MGYG000001857_6|CGC2 55384.66 6.243
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001857 1776473 MAG Denmark Europe
Gene Location Start: 29755;  End: 31221  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001857_00242.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 2 479 2.6e-160 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02095 glgA 0.0 1 481 1 473
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PRK00654 glgA 0.0 1 484 1 466
glycogen synthase GlgA.
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 2 480 1 474
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
COG0297 GlgA 2.00e-164 1 487 1 484
Glycogen synthase [Carbohydrate transport and metabolism].
PRK14099 PRK14099 6.17e-106 1 480 4 478
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCG49430.1 2.27e-192 1 484 6 485
ALP39726.1 7.47e-191 1 484 6 485
ACQ94224.1 4.15e-189 1 482 1 479
QFI53540.1 4.63e-187 1 485 6 486
ATL98386.1 8.41e-185 1 482 6 483

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4HLN_A 8.19e-80 2 482 126 626
Structureof barley starch synthase I in complex with maltooligosaccharide [Hordeum vulgare]
3D1J_A 1.63e-78 1 478 1 473
ChainA, Glycogen synthase [Escherichia coli]
2QZS_A 2.83e-78 1 478 1 473
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3COP_A 2.18e-77 1 478 1 473
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
1RZU_A 6.61e-71 1 484 1 478
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A4SIE1 1.11e-183 1 482 6 483
Glycogen synthase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=glgA PE=3 SV=1
A0KPQ1 2.96e-181 1 482 6 483
Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=glgA PE=3 SV=1
Q6LKA1 1.73e-160 1 483 13 495
Glycogen synthase OS=Photobacterium profundum (strain SS9) OX=298386 GN=glgA PE=3 SV=1
B6EQL7 1.86e-153 1 478 6 480
Glycogen synthase OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=glgA PE=3 SV=1
C3LN49 2.60e-151 2 481 5 481
Glycogen synthase OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001857_00242.