dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001866_02238

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Basic Information help

Species

Prevotella sp003447235

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp003447235

CAZyme ID

MGYG000001866_02238

CAZy Family

GH2

CAZyme Description

Evolved beta-galactosidase subunit alpha

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1083		121878.3	5.1331

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001866	2708253	MAG	Denmark	Europe

Gene Location

Start: 2671; End: 5922 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000001866_02238.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH2	73	955	9.3e-187	0.9813829787234043

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK10340	ebgA	0.0	47	1083	6	1003	cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525	lacZ	7.63e-179	47	1050	19	998	beta-galactosidase.
COG3250	LacZ	1.59e-122	86	958	8	808	Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836	Glyco_hydro_2_C	4.65e-76	385	687	1	302	Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02929	Bgal_small_N	7.33e-53	820	1077	5	230	Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AGB28379.1	0.0	4	1081	151	1210
ATS05896.1	1.33e-274	52	1079	54	1067
QUI90955.1	1.88e-274	52	1079	54	1067
QUI89009.1	1.88e-274	52	1079	54	1067
ATR96816.1	2.66e-274	52	1079	54	1067

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6S6Z_A	4.30e-177	47	1081	6	985	Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A	4.42e-177	47	1081	7	986	Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A	3.04e-146	51	1079	13	996	ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A	3.37e-141	51	1070	16	992	Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3MUZ_1	4.38e-122	30	1052	30	1025	E.Coli(lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MUZ_2 E.Coli (lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MUZ_3 E.Coli (lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MUZ_4 E.Coli (lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MV0_1 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV0_2 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV0_3 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV0_4 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV1_1 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12],3MV1_2 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12],3MV1_3 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12],3MV1_4 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q56307	2.42e-176	47	1081	7	986	Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847	1.83e-160	44	1052	20	1006	Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A5F5U6	1.23e-142	47	1052	15	992	Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q7MG04	3.23e-138	47	1082	15	1031	Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=lacZ PE=3 SV=1
A1SWB8	9.63e-138	47	1064	15	1020	Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.002282	0.996622	0.000456	0.000216	0.000199	0.000203

TMHMM Annotations help

There is no transmembrane helices in MGYG000001866_02238.