CAZyme Information: MGYG000001867_00058

Basic Information

• Species: CAG-873 sp900555715
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-873; CAG-873 sp900555715
• CAZyme ID: MGYG000001867_00058
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
868	MGYG000001867_2|CGC1	96734.11	6.4024

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001867	2424881	MAG	Denmark	Europe

• Gene Location: Start: 34225; End: 36831 Strand: +

Full Sequence      

MKRQFRFIPVILAALACPQSYAGKTVSLTKAMPDSLWECSQWISAADAPVVTGRIEGRNE
RAADGASWFVCSVKNPAKVIGARWMTTGLGVYTLYINGKPIGEEILKPGFTHYEKTKLSF
TYDITGAMSLRPGAENVFSVQSTPGWWADKIITPGGQEGMTGRKPAFRGVIELTFSDGTR
KYYGTDTSSWKAGIAGPVRHAAIFDGEEYDARIAPGSLTPELLSAPEENKEFAGRIYPSD
GAEIYFREDLALKPVRAYKWEGISGATDKEHGKVNITKEYPGGKNMELRKGETIVIDFGQ
NCAAVPEFEFKAAEGTTLLCLPAELLNDGNGAESRGMDGPEGSAHRRNLRTPDDAMRISY
TFGPGNKTVRYRPTHSFFGYRFISLTADNDVTIRTVTSVPVSSITKAMQTGSITTGNESV
NKLISNTIWGMRSNYLSVPTDCPQRNERLGWTADTQVFTNTGTFFADTRRFFHKWMRDMR
DTQRDNGSFPSVAPMAQYGALSTDYSRLGWGDAGIIVPWVVWKQFADTAIINGNWDAMMK
FHNHISATKYNHHCLRNDNGDYQYADWLSYEPLESCGGGIFMNDGNGNVCVRPEAYDYWN
YLSASYWLMDTRMMIDMARATGRDTKALQKIADEADEYIRRTFLMPDGTFRTPILNTMQT
PALFALRNGIVEGKAKEATIERLRRNFADHGNCLQTGFLGTSILMPVLTDNGMSDIAYDL
LFQRKNPSWLYSIDNGATTIWERWNSYMLDTGMGPAGMNSFNHYAYGCVCEWIWETAAGI
AADPADPGFRTIVMKPVPDRRLGSLDAVYTSPAGTIESHWKYDGDDWLWTFTVPEGAKAR
VTIPFENNENIYNAGTHNVKVRIPDATL

Enzyme Prediction     

No EC number prediction in MGYG000001867_00058.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	289	842	1.2e-135	0.9880952380952381

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.92e-100	409	776	2	339	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	3.76e-31	77	215	1	134	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam17390	Bac_rhamnosid_C	1.07e-14	784	844	4	64	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam05592	Bac_rhamnosid	4.58e-09	287	396	2	101	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBK93107.1	0.0	2	859	11	866
QUR48396.1	0.0	2	859	11	866
QIX65068.1	0.0	2	859	11	866
QUT20979.1	0.0	2	859	3	858
QJE29828.1	0.0	2	859	11	866

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	3.01e-109	78	865	315	1014	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	8.01e-85	80	862	145	866	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6I60_A	6.59e-62	66	844	176	899	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	1.30e-108	78	865	315	1014	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	4.55e-108	79	851	187	886	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	1.93e-91	78	844	182	879	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	1.16e-48	32	843	141	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000490	0.612080	0.386792	0.000276	0.000191	0.000169

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001867_00058.