CAZyme Information: MGYG000001876_00988

Basic Information

• Species: Acetatifactor sp900760705
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Acetatifactor; Acetatifactor sp900760705
• CAZyme ID: MGYG000001876_00988
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1801	MGYG000001876_18|CGC1	194997.96	4.2314

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001876	3172346	MAG	Denmark	Europe

• Gene Location: Start: 38606; End: 44011 Strand: -

Full Sequence      

MKGRKKRLALLLCMALATNIFVPGGGRAYALETVTESGDAALESLAAPETGNEEKTTSGA
EPGVSAVSGSDAVLLSAKGVEAADPQGEMLVYYIDAEAGDDAADGLSAETPWKSLEKINE
TVFQPGDCILFKAGCSWTGQLWPKGSGTEEAPIRIDRYGEGAAPLIIGTATMDKETDQDF
YKGAAVVLHNQEYWEISSLEITNTDPITSTGPDADVSLLTKNRRIGVAVTTRSPGDGKET
YHHIYLKDLYIHDISGEVGRDNGGILIRNQQGGNRTNFEDVQILNCTISNIVGNGITTSS
DYVLQYMGTEETGGNPTRWGEFPGKTRVDWGSGPQFKSKDILISGCKLQNIWCDGILTIN
VDHPVIEYNVCDNACYAPGAYAAIWPHSSNDALIQFNEVSNTRFVGGDGQAFDVDYNCDN
AIVQYNYSHDNEGGFLLLMESANYVTVRYNISVNDGVKGTAQGLLDIRAGNVSIYNNTFY
SDAEVLATHVENGFSGNGVIANNIFYAKTPVNMPAWKTDSKASYVYHNNAIYGYTGLPED
DALVTADPGLKNPGTAGEGLNSVEGYGLKKTSPCIDSGMEIADNGGRDYLGNLLSDGAVD
IGAIEASEKGKKADDIAVKASSVVISSQDNRRTVTQKEPTLQLYAEVLPFEADIHEVVWS
VTSLDGKSTALAEISEEGLLTGIENGTVRVIATAADGSGAYGEMEITLQMKASSANQVVD
DLNIDDFSKMYEHSGELWMDKNLGDYFGDYARLIRSNKYDTSFVRYATYHYERINGFVVT
AYYQNYTDGEKQPIEDISFFVSADNENWRQVTAEEYETEDSEFRAGETESASVWTKRIYT
CDTLEGGDNYFKVTFPQQYSEGKYYDPNIGQIILNLAAQVEEIRIETDKDAITEPEGELT
CTAYAYPEGAAYSSVSWSVENPDGSQTTKASIDNQGKLKAYNNGTVIVKAVSTLDGSIEA
RKEITISGQPANILDTCRDFSVIWKQNGLQTEYVGWFAGGTHTIHPYGGSSDRYMIYKAG
NIRGFRVNTNFLDGVERNLTFYGSEDGENFTELTNVAYDQTNLGGAKGRSYHMEQLADGV
NYLKIQFAEGFSWEANITKVQLFFDDMTGMELKVTADSDRIDVYDGQLQMSTEPAGVAVT
WSVTDENGLPTNKAQIDENGLLTGKSRGTVLVNAVAKADQSIMGSKEITIHTKVYQRMED
DFRYSEGYETGNADNLLQKTLHHSSGFWHQKIDWAGAYGLYVHDWMAPNFLEYSCENLAE
FEVKTLCRYDFAEGADFVFKASEDGKNWVTLEGVTKSSSGGNWPIVTYSKKDMNSKYRFF
RVEYPDAAQNAGSNINLCGVNLVSEIRVTQMTISADKGQTEDGEDQYVIPALGESIRFTA
HTDTTAIPGMILWTVEDVEETAGVYRMQNTAAASTRASITQDGVLTAIDYGTVKVTAEAQ
DGSGVSHSVLVTIQSIHPENIVLNKQNKVMQVGDVLDLQYRIYPANAVEQSVTYLSENEE
VVSVTQKGRVRALQAGETDIIVTTVDGGITAVCHVIVSDAKVCLEQLIAQCEALEETDYL
EESWKPFAQTLAEAKAVLAAADSRKEDWNAASESLLSARDSLVGVEDAFGGLTVLMRRAE
ALDFTLYTEESFAAVQSAYLNAQNVTAKGNMATRAEITEAANALQLALDGLTLKSTEEDQ
PGNNGGGNQGGNNQPGGSTGDDSKPGNGGAASGDNSGSGSNTGDNAGTTGGNNQPESNTG
NDNNQSGNKTENTEEPSAGNTSDGSRSPATGEAGQFILLFGGIGLLAGLSSLFLGKRYKK
D

Enzyme Prediction     

No EC number prediction in MGYG000001876_00988.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	91	605	1.5e-131	0.9918533604887984

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam02368	Big_2	1.10e-08	1460	1535	2	77	Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam13229	Beta_helix	2.96e-07	263	450	1	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
COG5492	YjdB	3.82e-07	1451	1540	174	264	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368	Big_2	1.92e-05	633	700	4	72	Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
NF035936	agg_sub_LPXTH	4.38e-04	1698	1774	45	129	serine-rich aggregation substance UasX. Members of this protein family are repetitive, serine-rich surface proteins of the Firmicutes, found primarily in the genus Leuconostoc. The variant form of sortase signal, LPXTH, is replaced by LPXTG in members from some lineages, such as Weissella oryzae, and therefore recognizable. Some members of this family have the KxYKxGKxW type signal peptide as seen in the glycoprotein adhesin GspB, a substrate of the accessory Sec system for secretion. WOSG25_050600 from Weissella oryzae SG25 is identified in a publication as an unnamed aggregation substance, a conclusion supported by the sorting signals and composition reported here. We assign the gene symbol uasX (unnamed aggregation substance X) based on our evaluation of the family.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QJD84649.1	8.39e-80	92	640	257	769
QUH27719.1	7.92e-78	73	605	17	507
SMF84525.1	2.00e-76	92	605	38	520
AIQ28911.1	4.53e-76	92	605	47	526
AIQ57722.1	5.16e-76	92	605	39	518

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7V6M_A	9.26e-62	92	607	11	578	ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A	1.81e-41	78	607	6	598	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A	2.92e-41	92	607	16	610	ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A	9.11e-37	92	493	247	653	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A	3.82e-36	92	493	247	653	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P33747	5.79e-09	1417	1539	81	203	Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000267	0.998977	0.000215	0.000180	0.000164	0.000149

TMHMM  Annotations     

start	end
1773	1795