CAZyme Information: MGYG000001876_01730

Basic Information

• Species: Acetatifactor sp900760705
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Acetatifactor; Acetatifactor sp900760705
• CAZyme ID: MGYG000001876_01730
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
871		96830.43	4.7983

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001876	3172346	MAG	Denmark	Europe

• Gene Location: Start: 626; End: 3241 Strand: +

Full Sequence      

MRKIKEATGCSVTALSLSQVEIFRAKTFGAGPDKSAVENTKAINAAIAAAHEAGGGTVEI
EEGDYHVYTIHLLSNVNLHLMKGAILHAARTDIKNSYEKQVGEGGNYEEPEVNLYAGLQD
HGHTYFANSLIYGADIENVMIYGEGLIDGSYLDEDGYLKYVLQGGDPFGSKYRNQKGYEG
EWFGNKGIALVRVKNVVLKGFNLVIGGHFAIIAEGVENMLIEGVLVDTTRDALDVDCCVD
VTVRNSVFNSLTDDALVMKSSYGAGKFMPTKNVLIEDCKVSGYDAGSVYAKVYTRDKLIA
TDRCGPTGRVKLGTEATCGYEQVTVRRVKFDRSRGFALEAVDGSDLQDIIFTDCEMDNVS
SSPIFIKAGERGRFPVTGNSTEQLVVAGEGNVRLDNKEWVLPNLEEYTKYPALRYAPSYI
KDKKISIDGHSFFTIVDPKNPARINEANIAKVDGKCYAKKYDAEKGEYVPDLNAPIEEKD
LVKYANASGAAHMARVGNIEISNVKITNADPRYPMILMGLMDSKLENIVIRNIQVEYRGG
MKKEHAVEQRQLNTNWEYTQFETAKSVQTLPWLINTFFLKNEGLLPRLDWDPEKKSWKED
PYNVPEMPGVYPEPSNWGILPAYGMYARHVEGLTLENVKVSFQVEDERHPFVFDDVADLT
MKGIQADRAENIADVGLVTNHYKRPTNMEYVLEEPYQTTAVTGEQIEEKLCVEHIEVNAP
APGTPQDSLYPYPTVPCPETGYTYPVKTEDYPLPLTVHRPFFKAPEVVKCKAGETMRFTV
SVRNPALEVLEENPDAHIYNEVVAVKDYTVGAAKLSASLNAYQLPQGASFDEKTGEFTWT
PTGEQKGICLVNFVYDDKVIPERHDVTLEVL

Enzyme Prediction     

No EC number prediction in MGYG000001876_01730.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	49	369	1.9e-33	0.7538461538461538

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	3.68e-24	57	359	116	398	Polygalacturonase [Carbohydrate transport and metabolism].
pfam13229	Beta_helix	0.005	187	282	2	89	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05345	He_PIG	0.010	807	847	30	70	Putative Ig domain. This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCJ93914.1	0.0	1	871	1	883
AXB28928.1	0.0	4	870	63	917
CBL02329.1	0.0	4	870	45	899
AHG93184.1	1.42e-90	23	669	35	505
QOY86475.1	5.41e-88	18	679	19	506

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3JUR_A	3.89e-09	28	366	33	358	Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A	1.35e-06	23	147	45	152	Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000008	0.000018	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001876_01730.