CAZyme Information: MGYG000001878_01228

Basic Information

• Species: Parabacteroides sp900548175
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900548175
• CAZyme ID: MGYG000001878_01228
• CAZy Family: GH163
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
731		83119.38	5.7903

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001878	3414068	MAG	Denmark	Europe

• Gene Location: Start: 19573; End: 21768 Strand: +

Full Sequence      

MKRIGRMWGLAALSAFLWMADASAQLTLVKDGKAVSRIVLSEKNDINHQAADLLQDFVQR
ISGASLPIVEGKAKAGDVVIGGKSTEAGEDGFTICTEQNQLRITSGGDKGSIYGVVTLLE
KYMGVSYYAYKAYTLTPSKTITLPEIHLSETPAFRYRQSFSYGCDDPIYKMWFRLEEPDE
VFIDNMWVHTFDRLMPSDVYGKEHPEYYSYINGEHRPGNHSQWCLTNPDVYNFVVQKLDS
IFKANPDKKLISVSQNDGNNTFCTCENCRKVYEEEGSPAGAYIRFMNKLAERFPDKEIST
LAYLFTMHPPKKVKPLPNVNIMLCDIDCKREVPLTDNASGREFVEALEGWSAISDNIFVW
DYGINFDNMVSCFPNFHVLQKNIQLFKKNHATMHFAQVNGTKGTDFSEMRAYMIGKLMWD
PYQNADSLMRSFMNGYYGAAAPYLYQYQKIMQGGLLASGIDLWIYDSPVSHKNGMLNDRL
CKTYDELFDQAEAAVASDTTLHNRVQLSRLSLIYSELEIARTKTNQDVAKVRQQLDYFRQ
QCRKFGIKSLNERNNAPEDYCDLYEKRFLPQAEKSKALGAKVIWLQKTGERYQQMAETAL
TDGLFGGTTFVESWVGWEGVDGSFILDLGEEKEFSTVEADFLHQLGQWILLPKKVTYSIS
TDNQTYQPFGSFSFAEDRDPQVKFVGGKVTSDKPVKARYIKVEVDAIGMCPAWHYGVGHP
AWFFMDEVTVL

Enzyme Prediction     

No EC number prediction in MGYG000001878_01228.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH163	194	447	2.2e-104	0.9920318725099602

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16126	DUF4838	2.39e-140	187	448	1	263	Domain of unknown function (DUF4838). This family consists of several uncharacterized proteins found in various Bacteroides and Chloroflexus species. The function of this family is unknown.
pfam00754	F5_F8_type_C	1.52e-05	599	704	16	112	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd14791	GH36	4.15e-04	197	298	94	194	glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
pfam02838	Glyco_hydro_20b	5.19e-04	22	119	14	105	Glycosyl hydrolase family 20, domain 2. This domain has a zincin-like fold.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCY55671.1	0.0	1	730	1	731
QUT53540.1	0.0	1	730	1	731
ANU63563.1	0.0	21	730	18	731
ASB38357.1	0.0	21	730	18	731
QQR09102.1	0.0	21	730	18	731

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000409	0.998834	0.000212	0.000171	0.000173	0.000165

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001878_01228.