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CAZyme Information: MGYG000001878_01535

You are here: Home > Sequence: MGYG000001878_01535

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp900548175
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900548175
CAZyme ID MGYG000001878_01535
CAZy Family GH142
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
515 MGYG000001878_25|CGC1 59757.1 4.9403
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001878 3414068 MAG Denmark Europe
Gene Location Start: 34944;  End: 36491  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001878_01535.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH142 35 503 4.2e-170 0.9832985386221295

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3408 GDB1 1.85e-04 153 363 345 557
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO14849.1 1.57e-254 11 515 13 515
AST55953.1 1.57e-254 11 515 13 515
QUT20767.1 1.57e-254 11 515 13 515
QUT97167.1 1.57e-254 11 515 13 515
QKH99529.1 1.57e-254 11 515 13 515

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQS_A 8.61e-116 32 514 629 1104
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQR_A 2.02e-108 32 514 629 1104
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 1.71e-14 60 500 309 798
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 1.20e-13 60 500 340 829
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000236 0.999179 0.000144 0.000147 0.000133 0.000127

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001878_01535.