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CAZyme Information: MGYG000001878_01560

You are here: Home > Sequence: MGYG000001878_01560

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides sp900548175
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900548175
CAZyme ID MGYG000001878_01560
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1045 MGYG000001878_26|CGC1 119536.44 5.0014
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001878 3414068 MAG Denmark Europe
Gene Location Start: 30503;  End: 33640  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001878_01560.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 48 716 7.5e-77 0.787621359223301

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.38e-06 265 659 444 839
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKH96611.1 0.0 11 1044 1 1036
QUT50138.1 0.0 34 1044 26 1036
SCM58509.1 0.0 12 1045 5 1030
BBD46126.1 0.0 14 1044 1 1034
QGT72310.1 0.0 48 1044 39 1034

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 5.33e-11 265 1023 306 1125
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.214591 0.040037 0.744981 0.000072 0.000137 0.000185

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001878_01560.