dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001880_00500

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Species

Lineage

Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; HGM11327; HGM11327;

CAZyme ID

MGYG000001880_00500

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
539		61055.52	5.0922

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001880	1865592	MAG	Denmark	Europe

Gene Location

Start: 12353; End: 13972 Strand: +

No EC number prediction in MGYG000001880_00500.

Family	Start	End	Evalue	family coverage
GH29	10	313	2.4e-58	0.8583815028901735

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3669	AfuC	2.26e-41	8	415	9	430	Alpha-L-fucosidase [Carbohydrate transport and metabolism].
pfam01120	Alpha_L_fucos	1.70e-30	8	313	15	326	Alpha-L-fucosidase.
smart00812	Alpha_L_fucos	3.33e-24	10	313	12	328	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QTH43029.1	1.07e-137	7	521	5	515
ACO32076.1	7.67e-122	8	499	45	524
AXE18560.1	8.59e-110	7	507	21	521
QMV17947.1	5.68e-109	8	421	35	443
AYQ34472.1	5.30e-108	7	507	21	521

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3GZA_A	7.59e-67	7	415	7	440	Crystalstructure of putative alpha-L-fucosidase (NP_812709.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.60 A resolution [Bacteroides thetaiotaomicron VPI-5482],3GZA_B Crystal structure of putative alpha-L-fucosidase (NP_812709.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.60 A resolution [Bacteroides thetaiotaomicron VPI-5482]
5K9H_A	4.48e-58	10	427	39	472	Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified]
4ZRX_A	1.88e-52	10	417	32	460	Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483]
6ORG_A	3.63e-46	10	415	11	448	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6OR4_A	4.78e-45	10	415	11	448	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8GW72	8.78e-50	7	415	35	477	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3	2.85e-42	7	409	37	470	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
C3YWU0	1.62e-06	9	312	28	342	Alpha-L-fucosidase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56888 PE=3 SV=2

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000068	0.000000	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000001880_00500.