dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001880_00519

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Species

Lineage

Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; HGM11327; HGM11327;

CAZyme ID

MGYG000001880_00519

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
438	MGYG000001880_29\|CGC1	50686.17	4.9782

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001880	1865592	MAG	Denmark	Europe

Gene Location

Start: 5596; End: 6912 Strand: +

No EC number prediction in MGYG000001880_00519.

Family	Start	End	Evalue	family coverage
GH29	10	321	2e-56	0.869942196531792

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3669	AfuC	9.58e-34	11	423	9	430	Alpha-L-fucosidase [Carbohydrate transport and metabolism].
pfam01120	Alpha_L_fucos	2.21e-24	11	321	15	326	Alpha-L-fucosidase.
smart00812	Alpha_L_fucos	3.74e-23	20	321	23	328	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
pfam00754	F5_F8_type_C	3.76e-05	332	409	28	113	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QTH43029.1	4.00e-132	10	435	5	420
ACO32076.1	1.17e-121	11	429	45	453
QMV17947.1	7.66e-117	11	429	35	443
AEI49018.1	1.62e-111	10	425	21	430
AYQ34472.1	1.29e-110	1	425	14	430

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3GZA_A	5.13e-77	13	425	10	442	Crystalstructure of putative alpha-L-fucosidase (NP_812709.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.60 A resolution [Bacteroides thetaiotaomicron VPI-5482],3GZA_B Crystal structure of putative alpha-L-fucosidase (NP_812709.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.60 A resolution [Bacteroides thetaiotaomicron VPI-5482]
5K9H_A	2.92e-54	13	423	39	463	Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified]
4ZRX_A	3.59e-50	13	407	32	442	Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483]
6ORG_A	4.77e-42	13	423	11	448	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6OR4_A	4.60e-41	13	423	11	448	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q7XUR3	1.65e-45	13	423	40	476	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
Q8GW72	2.60e-44	10	332	35	349	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
P10901	4.99e-07	67	202	106	217	Alpha-L-fucosidase OS=Dictyostelium discoideum OX=44689 GN=alfA PE=3 SV=1

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000040	0.000000	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000001880_00519.