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CAZyme Information: MGYG000001884_00312

You are here: Home > Sequence: MGYG000001884_00312

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp900760615
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp900760615
CAZyme ID MGYG000001884_00312
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 81550.61 9.0212
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001884 3294047 MAG Denmark Europe
Gene Location Start: 2025;  End: 4190  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001884_00312.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 72 709 6.6e-128 0.9770290964777948

CDD Domains      help

MGYG000001884_00312 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM47039.1 0.0 1 721 2 721
AVM44573.1 1.19e-153 12 713 175 863
AVM47036.1 2.85e-143 26 714 187 860
AWI09682.1 3.73e-140 37 712 911 1574
ASV75458.1 3.53e-136 71 714 66 683

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z6P_A 1.90e-77 188 715 203 765
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
4BQ2_A 7.23e-76 188 712 184 746
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 1.92e-75 188 712 184 746
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A 6.49e-74 214 712 223 762
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 3.58e-75 14 712 235 952
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 1.23e-53 204 709 389 913
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000988 0.732011 0.266382 0.000224 0.000189 0.000179

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001884_00312.