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CAZyme Information: MGYG000001884_01306

You are here: Home > Sequence: MGYG000001884_01306

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp900760615
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp900760615
CAZyme ID MGYG000001884_01306
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
770 88039.21 9.6636
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001884 3294047 MAG Denmark Europe
Gene Location Start: 171;  End: 2483  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001884_01306.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 497 627 2.6e-32 0.9776119402985075

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 4.02e-48 30 451 9 448
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 8.36e-14 477 678 1 204
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV74042.1 1.11e-247 23 740 38 762
QDV65465.1 1.54e-218 23 751 85 824
QQE12574.1 2.15e-179 30 751 39 780
QDU34563.1 8.29e-179 8 724 16 753
AXA35159.1 4.19e-102 22 613 60 663

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 1.59e-75 23 723 16 745
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 2.11e-74 23 723 16 745
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]
6LJA_A 1.02e-44 35 655 43 719
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 2.53e-42 35 655 43 719
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000245 0.999137 0.000165 0.000148 0.000138 0.000137

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001884_01306.